| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2735 |
|---|
| Symbol | pdxA |
|---|
| ID | 4681571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 2715905 |
|---|
| End bp | 2716939 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639846993 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_994031 |
|---|
| Protein GI | 121599041 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC GTCCGCAGCC GCTGCGCATC GCGATCACGA CCGGCGAGCC GGCCGGCGTC
GGCCCCGAGC TGACGGCCCG CGCGCTCGCC GACGCGGCGA CGCGCTGGCC GGACGCGCGC
TTCACGGTGC TCGGGGACGC GAGCCTGATC GCCGCGCGCG CGGCGGCGGT CGGCCTCGAT
TGGACGCGCA TGACGGCGGC GGGGGGCGGT GCGCATGTCG CCAACGCGCA CGTCGCCAAC
GCGCACGTCG CCGTCGCGCA TCGCGCGCTT GCCGCGCCCG CCGAGGCGGG CAAGCTGAAT
CCGGCGAACG GGCGCTACGT GCTCGATCTG CTCGATGCGG CGATCGACGG CGCGCTCGCC
GGCGAATACG ACGCGATCGT CACCGCGCCG CTGCAAAAGA GCACGATCAA CGACGCCGGC
GTGCCTTTTA CCGGCCACAC CGAATATCTC GCCGAGCGCA CGCGCACGCC GCACGTCGTG
ATGATGCTCG CCGGCACGGG CGAGCGGCCG CTGCGCGTCG CGCTCGCGAC GACGCACCTG
CCGCTCAGGG ATGTGTCGGC CGCGCTGACG ATCGACGGTC TCGCCGATAC GCTGTCGATC
ATCGATCGCG ATCTGCGCGG CAGCTTCGGC CTTGCCGCGC CACGCATCCT CGTCACGGGG
CTCAATCCCC ATGCGGGCGA GCACGGCTAT CTCGGCCGCG AGGAAATCGA CGTGATCGAG
CCGGCGCTCG AGCGCGCGCG GGCGGCGGGC ATCGACGCGC GCGGGCCGTA CCCGGCCGAT
ACGCTGTTCC AGCCGCGTTA CCTCGAGCAC GCGGATTGCG TGCTCGCGAT GTTTCATGAT
CAGGGGCTGC CGGTCCTCAA GTACGCGACG TTCGGCGAAG GCATCAACGT CACGCTCGGC
CTGCCGATCA TCCGCACGTC GGTCGATCAC GGCACCGCGC TCGATCTCGC CGGCACCGGC
CGGGCCGATC CGGGCAGCCT CGTCGCCGCG ATCGACACCG CCGTGACGAT GGCGCGCCAT
CGGCGCGCGG GCTGA
|
|---|
| Protein sequence | MSDRPQPLRI AITTGEPAGV GPELTARALA DAATRWPDAR FTVLGDASLI AARAAAVGLD
WTRMTAAGGG AHVANAHVAN AHVAVAHRAL AAPAEAGKLN PANGRYVLDL LDAAIDGALA
GEYDAIVTAP LQKSTINDAG VPFTGHTEYL AERTRTPHVV MMLAGTGERP LRVALATTHL
PLRDVSAALT IDGLADTLSI IDRDLRGSFG LAAPRILVTG LNPHAGEHGY LGREEIDVIE
PALERARAAG IDARGPYPAD TLFQPRYLEH ADCVLAMFHD QGLPVLKYAT FGEGINVTLG
LPIIRTSVDH GTALDLAGTG RADPGSLVAA IDTAVTMARH RRAG
|
|---|
| |