| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2709 |
|---|
| Symbol | |
|---|
| ID | 4680383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 2686853 |
|---|
| End bp | 2687260 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639846967 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_994005 |
|---|
| Protein GI | 121600766 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTA TCGATACGAG CGAATTCCGA AAAACCGTCT TCAGCCCCTC CTTCTGGGAA
GACAAGATGG GCTACGCGCG CGGCAAGCGG GTCGGCAATC ACGTGTACAT CGCGGGCTGC
GTCGCGTCGG ACGGCAACGC CGCCGTGATC GGCAACGATG CGTACGAGCA GACCGCGTTC
ATCATCGCCA AGATCGAGAA GTACCTGAAC GAGCTCGGCG CCGAGCTGAG CGACGTCGTC
AGCACGGTCA CGCACCTGAC GGGCTTCGAG CACTTCGACG ACTACTGCCG CGCGTTCAGC
GAGCGCTTTC GCGACATCCG CCCGGTCAAC ACGACGGTCG CGGTGAAGTC GCTCGTCGAG
CCCCGGCATT ACGTCGAGAT CACCGCGACG GCGATCGTCG GCGATTGA
|
|---|
| Protein sequence | MSTIDTSEFR KTVFSPSFWE DKMGYARGKR VGNHVYIAGC VASDGNAAVI GNDAYEQTAF
IIAKIEKYLN ELGAELSDVV STVTHLTGFE HFDDYCRAFS ERFRDIRPVN TTVAVKSLVE
PRHYVEITAT AIVGD
|
|---|
| |