| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2560 |
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| Symbol | |
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| ID | 4681679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 2541936 |
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| End bp | 2542859 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639846821 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_993862 |
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| Protein GI | 121598289 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACGG CCTTTTACAC GCACCCCGAC TGCCTGCTGC ACGAGATGGG GGAGTGGCAT
CCCGAGTCGC CGGCGCGGCT GTCGGCGATC CAGGATCAAC TGATCGCGAG CCGCATCGAC
GACCTGATCG TCCACGAGAC GGCGCCGTTC GCGAGCGAGA CGGCGCTGGC CCGCGTGCAT
ACGCAGGCGC ACATCGATTA CATCCGCAGC CGGATTCCGA AGGATGGGTA CGTCGAGATC
GATCCCGACA CGTCGCTGAA CCGCTACACA TGGCGCGCGG CGCTGCGCGC GGCCGGCGCG
GCCGTCGAGG CGACGGACGC GGTGCTCGAA GGCCGCTACG ACAACGCGTT CTGCAGCGTG
CGCCCGCCGG GCCATCATGC GGAACCCGCG CGCGCGATGG GCTTCTGTTT CTTCAACAAC
GTCGCGATCG CCGCGCGCCA CGCGCTCGAG ATCCACGGCC TCGAGCGCGT CGCGATCATC
GATTTCGACG TCCATCACGG CAACGGCACC GAGGCCGCGT TCGCGAACGA CGAGCGCGTG
CTGATGTGCA GCTTCTTCCA GCATCCGCTG TATCCGTTTT CGGGCGTCGA CCACCAGGCG
CCGAACATGG TCAATCTGCC GATGGCCGCG CGCACCAACG GGATGGCGGT GCGCGAGGCG
GTCGATCTGA TGTGGCTGCC GCGGCTCGAT GCGTTCAGGC CGCAGATGCT GTTCGTGTCG
GCGGGGTTCG ACGCGCACCG CGAGGACGAC ATCGGCGGGA TGGGGCTCGT CGAGGCCGAC
TACGAGTGGC TCACGCAGCA GATCTGCGAA GTCGCGCGGA GGCATGCGCA AGGCCGGATC
GTGAGCTGCC TCGAAGGCGG CTACAACCTG TCCGCGCTCG GGCGAAGCGT GGTCGCGCAT
CTGCGCGTGC TCGCCGGCGT GTGA
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| Protein sequence | MPTAFYTHPD CLLHEMGEWH PESPARLSAI QDQLIASRID DLIVHETAPF ASETALARVH
TQAHIDYIRS RIPKDGYVEI DPDTSLNRYT WRAALRAAGA AVEATDAVLE GRYDNAFCSV
RPPGHHAEPA RAMGFCFFNN VAIAARHALE IHGLERVAII DFDVHHGNGT EAAFANDERV
LMCSFFQHPL YPFSGVDHQA PNMVNLPMAA RTNGMAVREA VDLMWLPRLD AFRPQMLFVS
AGFDAHREDD IGGMGLVEAD YEWLTQQICE VARRHAQGRI VSCLEGGYNL SALGRSVVAH
LRVLAGV
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