Gene BMASAVP1_A2535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2535 
Symbolorn 
ID4681156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand- 
Start bp2519472 
End bp2520077 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID639846796 
Productoligoribonuclease 
Protein accessionYP_993837 
Protein GI121598453 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.391495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TCTCCGCCGT GGCCGGCCAG CCCGCGCTCG TTCGCAACGA ACTGAACCTC 
GTTTGGCTCG ACATGGAAAT GACGGGCCTG GACCCGGACA CCGACCGCAT CATCGAGATC 
GCCGTCGTCG TCACCAATTC GACCCTCGAC ATCGCGGTCG AGGGGCCGGT GCTCGCGATC 
CATCAGAGCG ACGAGACGCT TGCGAAGATG GACGACTGGA ACAAGAACAC CCATGGCCGC 
TCGGGCCTCA TCGACCGCGT GCGCGCGTCG AGCGTCACCG AGGCGGACGC CGCCGCGCAG 
ATCGCGGCGT TTCTCGCCGA GCACGTGCCG CCCGGCAAGT CGCCGATGTG CGGAAATTCG 
ATCTGCCAGG ACCGCCGCTT CATGGCGCGC TGGATGCCCG AGCTCGAACG CTTCTTTCAT 
TACCGCAACC TCGACGTGAG CACGCTCAAG GAGCTGTGCC GGCGCTGGCA GCCCGCGATC 
TACAAGGGTT TCCAGAAGCG CGCGATGCAT ACCGCGCTCG CCGATATCCA CGAGTCGATC 
GACGAGCTCA AGTATTACCG CGAGCGTTTT CTGATTCCGG CCGCGCCGGC GGGCGAGACC 
GCGTAA
 
Protein sequence
MTDISAVAGQ PALVRNELNL VWLDMEMTGL DPDTDRIIEI AVVVTNSTLD IAVEGPVLAI 
HQSDETLAKM DDWNKNTHGR SGLIDRVRAS SVTEADAAAQ IAAFLAEHVP PGKSPMCGNS 
ICQDRRFMAR WMPELERFFH YRNLDVSTLK ELCRRWQPAI YKGFQKRAMH TALADIHESI 
DELKYYRERF LIPAAPAGET A