Gene BMASAVP1_A2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2473 
SymbolrpoE 
ID4680156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2464692 
End bp2465291 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID639846734 
ProductRNA polymerase sigma factor RpoE 
Protein accessionYP_993777 
Protein GI121601351 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAA AAGAAATCGA TCAGGTACTG GTCGAACGCG TACAGAATGG CGACAAGGCG 
GCGTTCGAAC TCCTGGTCTC CAAATACCAC CGCAAGATCA TCCGGCTGAT CTCGCGCCTC
GTGCGGGATC CCGCGGAGGT CGAGGACGTG GCCCAGGACG CGTTCATCAA GGCGTATCGC
GCGTTGCCGC AGTTTCGCGG CGAGTCGGCG TTCTACACGT GGTTGTACCG GATTGCCGTC
AATACGGCGA AGAACTACCT TGCGACCCAG GGGCGCCGGG CGCCCACGTC CACCGACGCG
GACGCCGAAG AGGCTGAAAC TTTCTCCGAC GCGGACCAAC TAAGGGATAT CAACACGCCT
GAGTCGATGT TGATGAGCAA GCAGATCGCC CAAACGGTCA ACGCCGCGAT GGCGCTGTTG
CCGGAAGAGT TGCGAACGGC CATCACGCTG CGCGAGATCG AAGGTCTGAG CTACGAAGAG
ATCGCGGAGA TGATGGGTTG CCCGATCGGC ACCGTCCGCT CGCGGATCTT TCGCGCCCGC
GAGGCGATCG CGGCAAAATT GCGGCCGCTG CTCGATACGC CGGAAGGCAG GCGCTGGTAA
 
Protein sequence
MSEKEIDQVL VERVQNGDKA AFELLVSKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR 
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRAPTSTDA DAEEAETFSD ADQLRDINTP
ESMLMSKQIA QTVNAAMALL PEELRTAITL REIEGLSYEE IAEMMGCPIG TVRSRIFRAR
EAIAAKLRPL LDTPEGRRW