Gene BMASAVP1_A2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2470 
Symbol 
ID4680788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2461423 
End bp2462931 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content69% 
IMG OID639846731 
Productserine protease, MucD 
Protein accessionYP_993774 
Protein GI121598480 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATC CCTCGCTGCG CACCTGGCTC GTCGCCGCGG CGGTGACGGC CTTGACGCCG 
CTTGCCGCGC AATCGGCGAC GGCGGCTCCG AATGTCACGA CCACGCCCGC CGCAACGGGC
GCCGTGCCCG CGGCGCGCGC GGGCCTGCCC GATTTCGCGG ACCTCGTCGA GCGGGTCGGC
CCGGCGGTCG TCAACATCCG GACGACGGCG AACGTGCCGG CCGATACGCG CGGCGCGCTG
CCGCCCGGCC TCGACAACGG CGACATGTCG GAATTCTTCC GCCGCTTCTT CGGCATTCCG
TTGCCGCAGG GGCCGGGCGG GCAGAAGAAC GCGCCGAGCA CGCCCGATGC GCCCGACACC
GAACAGAACC GCGGCGTGGG CTCGGGCTTC ATCCTGTCGC CGGACGGCTA TGTGATGACG
AACGCGCACG TCGTCGACGA CGCGGACACG ATCTACGTGA CGCTCACCGA CAAGCGCGAA
TTCAAGGCAA AGCTCATCGG CGTCGACGAG CGCACGGACG TCGCGATCGT GAAGATCAAC
GCGTCGAGCC TGCCGACCGT CGCGATCGGC GATTCGAACC GCGTGCGCGT CGGCGAATGG
GTCGTCGCGA TCGGTTCGCC GTTCGGCCTC GACAACACCG TCACGGCCGG CATCGTCAGC
GCAAAGGGCC GCAACACCGG CGACTATCTG CCGTTCATCC AGACGGACGT CGCGGTCAAC
CCCGGCAACT CGGGCGGCCC GCTCATCAAC ATGCAGGGCG AGGTGATCGG CATCAACTCG
CAGATCTACA GCCGCACGGG CGGCTTCATG GGCATTTCGT TCGCGATTCC GATCGACGAG
GCGATGCGCG TCGCCGAGCA GCTGAAGGCA TCGGGCAAGG TCACGCGCGG CAGGATCGCG
GTCGCGATCG GCGAGGTGAC GAAGGAAGTG GCGGATTCGA TCGGCCTGCC GAAGGCCGAA
GGCGCGCTCG TCAGCAGCGT CGAGCCAGGC GGCCCGGCCG ACAAGGCGGG CCTGCAGCCG
GGTGACATCA TCCTGAAGTT CAACGGCCGT CCGGTGGAGG CGGCGTCGGA TCTGCCGCGC
ATGGTCGGCG ACACGAAGCC GGGCGCGAAG GCGACGGTGA CGGTGTGGCG CAAGGGGCAA
TCGCGCGATC TGCCGATCAC GATCGCGGAA TTCCCGGCCG ACAAGGCCGC GAAGGCCGAC
AGCCGTCAGG CGCCGCAGCA GAAGCCGCGC AGCAGCGCGC TCGGCCTGAC GGTCAGCGAC
CTGTCGCCCG AGCAGTTGAA GACGCTCAAG CTGCGCAACG GCGTGCAGAT CGACGCGGTC
GACGGCCCGG CCTCGCGCGC GGGGCTGCAG CGCGGCGACA TCGTGCTGCG CGTCGGCGAC
GTCGACATCA CGAGCGCGAA GCAGTTCGTC GACGTGACGT CGAAGCTCGA TCCGCAGCGC
GCGGTCGCGG TGCTCGTGCG GCGCGGCGAG AACACGCAGT TCATCCCGAT CCGGCCGCGT
CAGAAGTGA
 
Protein sequence
MMNPSLRTWL VAAAVTALTP LAAQSATAAP NVTTTPAATG AVPAARAGLP DFADLVERVG 
PAVVNIRTTA NVPADTRGAL PPGLDNGDMS EFFRRFFGIP LPQGPGGQKN APSTPDAPDT
EQNRGVGSGF ILSPDGYVMT NAHVVDDADT IYVTLTDKRE FKAKLIGVDE RTDVAIVKIN
ASSLPTVAIG DSNRVRVGEW VVAIGSPFGL DNTVTAGIVS AKGRNTGDYL PFIQTDVAVN
PGNSGGPLIN MQGEVIGINS QIYSRTGGFM GISFAIPIDE AMRVAEQLKA SGKVTRGRIA
VAIGEVTKEV ADSIGLPKAE GALVSSVEPG GPADKAGLQP GDIILKFNGR PVEAASDLPR
MVGDTKPGAK ATVTVWRKGQ SRDLPITIAE FPADKAAKAD SRQAPQQKPR SSALGLTVSD
LSPEQLKTLK LRNGVQIDAV DGPASRAGLQ RGDIVLRVGD VDITSAKQFV DVTSKLDPQR
AVAVLVRRGE NTQFIPIRPR QK