| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2331 |
|---|
| Symbol | |
|---|
| ID | 4678872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 2335231 |
|---|
| End bp | 2335968 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639846594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_993640 |
|---|
| Protein GI | 121600245 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0105629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA AATCCGCTCT TGCCGTTGCC GTCACGCTCG CGGCGGCGCT GCCGATCGCG
CTCGCGCTCG CCCCGTCCGC CGCGCGCGCG CAAAGCATGG GGCAGATGCA GCCGCCCGCG
GGCGTGCTGT CGCTGTCCGC GCAGGCGAGC ACCGACGTCC CGCAGGACGT CGTCGATATC
ACGCTGTTCT ACGAACAACA GGCGAAGGAC CCGGGCACGC TGACCGCGGA GCTGAACAAG
CGCGCGGATA CGGCGCTCGC GCAGGCGCGC GGGGTCACGG GCGTCACGGC CCGCACGGGC
GAATTCTCGG TGTCGCCGAG CGTCGATCGC GACGGCAAGA TCTCCGCGTG GCGCGGCCGC
ACCGAGGTCG TGCTCGAGTC GCACGACTTC GCGGCCGCAT CGAAGCTCGC CGGCCAGTTG
AGCCCGATGA TGCAGGTGGG CAACGTGTCG TTCTCGCTGT CGCCCGAGGC GCAGCGCGCC
GCCGAGCAGA AACTCACGTC GGAGGCGATC AAGGCGTTCC GCGCGCGCGC CGAGGAAGCG
ACGCGTGCGT TCGGCTACAG CAACTACTCG ATCCGCGAGG TGAACGTCGG CAGCGGCCGC
AACGTGCAGC CGTACCCGCG GATGTTCGCG ATGGCCGCGC CCGCGATGGA CAGTGCGAAG
ATGAGCGCGC CGATCGCCGT CGAAGGCGGC AAGACGACCG TGACCGTCAA TGTGAACGGC
TCGGTGCAGA TGAAGTGA
|
|---|
| Protein sequence | MTKKSALAVA VTLAAALPIA LALAPSAARA QSMGQMQPPA GVLSLSAQAS TDVPQDVVDI
TLFYEQQAKD PGTLTAELNK RADTALAQAR GVTGVTARTG EFSVSPSVDR DGKISAWRGR
TEVVLESHDF AAASKLAGQL SPMMQVGNVS FSLSPEAQRA AEQKLTSEAI KAFRARAEEA
TRAFGYSNYS IREVNVGSGR NVQPYPRMFA MAAPAMDSAK MSAPIAVEGG KTTVTVNVNG
SVQMK
|
|---|
| |