| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2259 |
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| Symbol | hrpA |
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| ID | 4680177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 2251506 |
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| End bp | 2255633 |
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| Gene Length | 4128 bp |
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| Protein Length | 1375 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639846523 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_993570 |
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| Protein GI | 121598962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATG TACCTAAAAG TCCCGCGCAA AAACGTGCGG GCACGCCGGG CGAGCCGCAG
CCCGCCGGCG CCGCTGCGCC GCGGCCACCG CGCCCCCGGC AGGCGCCGCC CGCGCAGGCG
CGCGCGCCGC GCGCCGAGCG CCGCGACGCC GGCCCCGAAG CCGCCCGCGC GCCGCATGCG
CCGCGCACGC GGTGCGCGCC GAATCCCGTT CCGCCGATCA CGTTTGCCGA AAGCTTGCCC
GTGTCGGGCA AGCGCGACGA GATCGCGCGC GCGATCGCCG CTCACCCGGT CGTGATCGTC
TGCGGCGAGA CGGGCTCGGG CAAGACCACC CAGTTGCCGA AGATCTGCCT GGCGCTCGGC
CGCGGCCTCG GCGCGGGCGG CGCGGGCCTG ATCGGCCACA CGCAGCCGCG CCGGCTCGCG
GCGTCGTCGA CGGGCCGCCG GATCGCCGAG GAGCTCGGCA CGCCGTTCGG CGAGGTGGTC
GGCTACAAGG TGCGCTTCAC CGACAACCTC GCCCCGGGCG CCTCGGTCAA GCTGATGACG
GACGGGATCC TGCTCGCCGA GACGCAGACC GACCCGCTGC TGAAGGCGTA CGACACCCTC
ATCATCGACG AGGCGCACGA GCGCAGCCTG AACATCGATT TCCTGCTCGG CTACCTCCGG
CAGATCCTGC CGAGGCGGCC GGACCTGAAG CTGATCGTCA CGTCGGCGAC GATCGACGCC
GAGCGCTTCG CGCGCCATTT CGGCAGCGAC GAGCGGCCCG CGCCGGTGAT CGAGGTGAGC
GGGCGGCTGT ATCCGGTCGA GGTGCGCTAC CGGCCGATCG CCGATGACCG GCCGGCCGCC
GTCCGGCACG CGGAAGGCGG GAGCTCGGGC CGCGATCGCG CGAAGAGCGC GCGCGAGGCC
GAGCGCGACC TGATGGACGG CATCGTCGAC GCGGTCGACG AGCTGTGCCG CGAGGGCCCC
GGCGACGTGC TCGTGTTCCT GCCCGGCGAG CGCGAGATCC GCGACGCGGC CGAGGCGCTG
CGCAAGCACC ATCCGCCGCA CACCGAGATC CTGCCGCTGT TCGCGCGGCT GTCCGCGGCC
GAGCAGGAGC GCGTGTTCAA GGCGTCGAAC GCGCGGCGGA TCGTGCTCGC GACGAACGTC
GCCGAAACGT CGCTGACCGT GCCGGGCATC CGCTATGTCG TCGACACGGG CTTGGCGCGC
GTGAAGCGCT ATTCGTACCG GAACAAGGTC GAGCAGTTGC AGATCGAGCC GATCTCGCAG
GCGGCCGCGA ACCAGCGCGC GGGCCGCTGC GGCCGCGTCG CCGACGGCAT CTGCATCCGC
CTCTACGAGG AAAGCGATTT CGCCGGCCGC GCACGCTTCA CCGATCCGGA AATCCTGCGC
TCGTCGCTCG CGTCGGTGAT CCTGCGGATG AAATCGCTGC ATCTGTCGGC GATCGAATCG
TTTCCGTTCA TCGAGCCGCC GCCGGGCCGC GCGATCGCGG ACGGCTATCA GCTGCTCAAC
GAGCTCGGCG CGGTCGACGA CGAGAACGCG CTCACGCCGC TCGGCCGCGA GCTCGCGCGG
CTGCCGCTCG ATCCGCGCGT CGGCCGGATG ATCCTCGCCG CGCGCGACCA GCAGGCGCTG
CGCGAAGTGC TCGTGATCGC GAGCGCGCTG TCCGTGCAGG ACCCGCGCGA GCGCCCGGTC
GACGCGCAGG AGCAGGCCGA CCAGGCGCAC CGGCGCTTCG CCGACGAGCG CTCCGAGTTC
CTTCAGTGGC TGCGGATCTG GGCGTGGTTC GAGGAGGCGG TCGCGCACAA GAAGTCGAAC
CGGCAACTCG TCGACGCGTG CCGGCAGCAT TTCCTGTCGC ACCTGCGGCT GCGCGAATGG
CGCGATGTCC ACTCGCAGCT CCTGACCGTC GTGCGCGAGC ACGGCTGGCG GCTGAACGAA
GCCGATGCGA CGTTCGAGCA GATCCATCTG TCGCTGTTGA CGGGCCTGCT CGGCAACATC
GGCTTCAAGG CCGAGGACGA GCCGCACTAC CTCGGCGCGC GCGGCATCAA GTTCCATCTG
TGGCCGGGCT CCGCGCTCGT GAAGAAGGCG GGGCGCTGGG TGATGGCGGC CGAGCTCGTC
GAGACGAGCC GCCTCTATGC GCGCTGCATC GCGAAGATCG AGCCCGAATG GATCGAGCGG
ATCGGCGCGC ATCTGCTGAA GAAATCGCTG TCCGAGCCGC ACTGGGAGAA GCGGCCCGCG
CAGGTCGCCG CGTTCGAGCG CGCGACGCTG TACGGGCTCA CCATCTATCA CCGGCGGCGC
GTCGCGTTCG GCCGGCAGGA CCCGGCGCGC GCGCGCGAGC TGTTCATCCG CGGCGCGCTC
GTCGACGGCG AATTCGACAC GAAGCTCGCG TTCTTCGCGC ACAACCGCAA GCTGCTCGCC
GACATCGAGC AGCTCGAGCA CAAATCGCGC CGCCAGGACG TGCTCGTCGA CGACGAGCTG
ATTCACGCGT TCTACGATCA GGCGATTCCG GCCGGCATTC ACACGGGCGC CGCGTTCGAG
CGCTGGTATC GCGACGAGGT GAGCAAGAGC GGGCAGCCGG AAGACAAGCT GCGCCTGCTG
TATCTGTCGC GCGACGATCT GATGCGCCAC GAGGCGGCGG GCGTGACGAC CGAGCTGTTT
CCGAAGCGCG TGACGATGGC GGGCGTCGAG ATGGCGCTCG CGTACCACTT CGAGCCGGGC
TCGCCGCGCG ACGGCGTGAC GCTCGCGGTG CCGCTCTTCG CGCTGAACCA GGTCGACGCG
CGCCGCGCCG AATGGCTCGT GCCCGGCATG CTCAAGGAGA AGGCGCATCT GCTGCTGAAA
TCGCTGCCGC AGAAGCTGCG CCGCCATTGC GTGCCGCTGC CGGAGTACGC GGCGGGCTTC
GTCGAGCGCG CCGGGCGCGA GCGCTTCGGC GCGGGCGGCC TCGTCGACGC GCTGATCGCC
GACGTTCGCG AGCAGACGCA GGTCGCGACG AAAACGTCCG ATTTCAAGCT GGAGACGCTG
CCCGCGCACC TGTTCATGAA CTTCAAGGTG ATCGACGAGC ACGGCCGGCA ACTCGCGATG
GGGCGCAATC TCGCGCAACT GCGCGCGGAA CTGGGCGCGC AGGCGCAGCA GCACTTCCAG
AAGATCGCCG CCGCGGCGAC GCTCGCGCCG GCGGGCGAGC CCGCCGCGGC GGCCGCCGGC
GCGAGCGGCG CGCGGGCACG GCGCGTGCCG CTCGGCGCGC CGCCGCGGGC GGCCGAGCCG
GCGGCGCAAG CGGGCGCGGC CGCCGGCGCG ACCGCGCTCT ACGAGAACCT GACGACGTGG
AACTTCGGCA AGCTGCCGGA ACTCCTCGAA ATCCGCCGGC GCGGCGAGAC GCTGTTCGGC
TACCCGGCGC TCGTCGATCG CGGCACGCAT TGCGACGTCG AGGTGTTCGA TTCGCCCGAC
GAGGCGGCGC GGATCCACCG CGCGGGCCTG CGGCGCCTGT TCGCGCTGCA ACTGAAGGAG
CCGATCAAGT ATCTGGAGAA GAACCTGCCG GGGCTGCGCG AGATGGCGAT ACAGTACATG
TCGCTCGGCA CGCAGGACGA GCTGCGCGAC CAGCTGATCG CGACCGCGCT CGACCGCGCG
TGCCTGCAGG AACCGCTGCC CGCCGACGAC GCGAGCTTCC ACGCGCGCCG CGACGAGGGC
AGGAGCCGCC TGAATCTGCT CGCGCAGGAG ATCGCGCGGC TCGTCGGGCA GATCCTCGCC
GAGTACGCGG GGCTCGCGAA GAAGCTCGCG CAGGCCAAGC CGTTCCCGGC CGCGCACGCG
GACATGCAGG GCCAGCTCGC CGCGCTCGTC GGCAAGCGCT TCGTCGTCGA TACGCCTTAC
GCGCAGCTTG CGCACTTCCC GCGCTACCTG AAGGGAATCG CGCTGCGCAT CGACAAGCTG
AAGGCCGATC CCGCGCGCGA CGCGCGGCAG GCGGCCGAGC TGCAGCCGCT CGCGCAGCAT
TATCAGCGCT CGGTTGCGCA GCGCGGCGGC GTCGCGGACG CGCGGCTCGC CGAATTCCGC
TGGCTGCTCG AGGAGCTGCG GATCTCGCTT TTCGCGCAGG AGCTGCGCAC GCCGATGCCG
GTATCGGTCA AGCGGCTCTA CAAAGTGTGG GAGTCGATGC AGCGCTGA
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| Protein sequence | MSNVPKSPAQ KRAGTPGEPQ PAGAAAPRPP RPRQAPPAQA RAPRAERRDA GPEAARAPHA
PRTRCAPNPV PPITFAESLP VSGKRDEIAR AIAAHPVVIV CGETGSGKTT QLPKICLALG
RGLGAGGAGL IGHTQPRRLA ASSTGRRIAE ELGTPFGEVV GYKVRFTDNL APGASVKLMT
DGILLAETQT DPLLKAYDTL IIDEAHERSL NIDFLLGYLR QILPRRPDLK LIVTSATIDA
ERFARHFGSD ERPAPVIEVS GRLYPVEVRY RPIADDRPAA VRHAEGGSSG RDRAKSAREA
ERDLMDGIVD AVDELCREGP GDVLVFLPGE REIRDAAEAL RKHHPPHTEI LPLFARLSAA
EQERVFKASN ARRIVLATNV AETSLTVPGI RYVVDTGLAR VKRYSYRNKV EQLQIEPISQ
AAANQRAGRC GRVADGICIR LYEESDFAGR ARFTDPEILR SSLASVILRM KSLHLSAIES
FPFIEPPPGR AIADGYQLLN ELGAVDDENA LTPLGRELAR LPLDPRVGRM ILAARDQQAL
REVLVIASAL SVQDPRERPV DAQEQADQAH RRFADERSEF LQWLRIWAWF EEAVAHKKSN
RQLVDACRQH FLSHLRLREW RDVHSQLLTV VREHGWRLNE ADATFEQIHL SLLTGLLGNI
GFKAEDEPHY LGARGIKFHL WPGSALVKKA GRWVMAAELV ETSRLYARCI AKIEPEWIER
IGAHLLKKSL SEPHWEKRPA QVAAFERATL YGLTIYHRRR VAFGRQDPAR ARELFIRGAL
VDGEFDTKLA FFAHNRKLLA DIEQLEHKSR RQDVLVDDEL IHAFYDQAIP AGIHTGAAFE
RWYRDEVSKS GQPEDKLRLL YLSRDDLMRH EAAGVTTELF PKRVTMAGVE MALAYHFEPG
SPRDGVTLAV PLFALNQVDA RRAEWLVPGM LKEKAHLLLK SLPQKLRRHC VPLPEYAAGF
VERAGRERFG AGGLVDALIA DVREQTQVAT KTSDFKLETL PAHLFMNFKV IDEHGRQLAM
GRNLAQLRAE LGAQAQQHFQ KIAAAATLAP AGEPAAAAAG ASGARARRVP LGAPPRAAEP
AAQAGAAAGA TALYENLTTW NFGKLPELLE IRRRGETLFG YPALVDRGTH CDVEVFDSPD
EAARIHRAGL RRLFALQLKE PIKYLEKNLP GLREMAIQYM SLGTQDELRD QLIATALDRA
CLQEPLPADD ASFHARRDEG RSRLNLLAQE IARLVGQILA EYAGLAKKLA QAKPFPAAHA
DMQGQLAALV GKRFVVDTPY AQLAHFPRYL KGIALRIDKL KADPARDARQ AAELQPLAQH
YQRSVAQRGG VADARLAEFR WLLEELRISL FAQELRTPMP VSVKRLYKVW ESMQR
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