| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2207 |
|---|
| Symbol | lysS |
|---|
| ID | 4680147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 2189665 |
|---|
| End bp | 2191191 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639846471 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_993519 |
|---|
| Protein GI | 121601586 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGACCCAACC GCAGGCCGCT GTCGCAGCGG ACGAAAACCA GATCGTCGCG
GAGCGCCGCG ACAAGCTGCG CGCGCTGCGC GACCAAGGCA TCGCCTATCC GAACGACTTC
CAGCCGACGC ACCACGCGGC CGGTCTGCAG ACCGAATACG CGGACGCCGA CAAGGAAGCG
CTCGACGCGA AGGCGCTCGA CGTCGCGGTC GCCGGCCGGA TGATGCTCAA GCGCGTGATG
GGCAAGGCGA GCTTCGCGAC GGTGCAGGAC GGTTCGGGTC AAATCCAGTT CTTCGTGACG
CCCGCCGATG TCGGCGCCGA AACGTACGAC GCGTTCAAGA AGTGGGACCT GGGCGACATC
GTCGCCGCGC GCGGCGTGCT GTTTCGCACG AACAAGGGCG AGCTGTCGGT GAAGTGCACG
GAGCTGCGGC TGCTCGCGAA GGCGCTGCGT CCGCTGCCCG ACAAGTTCCA CGGCCTCGCC
GACCAGGAAA CGCGCTATCG CCAGCGCTAC GTCGATCTGA TCGTCACGCC CGAGACGCGC
GCGACGTTCC GCGCGCGCAC GAAGGCGATC GCGTCGATCC GCAAGTTCAT GAGCGACGCC
GATTTCATGG AAGTCGAGAC GCCGATGCTG CACCCGATCC CGGGCGGCGC GGCCGCGAAG
CCGTTCGTCA CGCATCACAA TGCGCTCGAC ATGCAAATGT TCCTGCGCAT CGCGCCCGAG
CTTTACCTGA AGCGCCTGAT CGTCGGCGGC TTCGAGCGCG TGTTCGAGAT CAACCGCAAC
TTCCGGAACG AAGGCGTGTC GCCGCGCCAC AATCCGGAAT TCACGATGAT GGAGTTCTAC
GCCGCGTACA CCGATTACCG CTGGCTGATG GACTTCACCG AGCGGCTGAT CCGCCAGGCG
GCCGTCGACG CGCTCGGCAC CGCGACGATC CGGTACCAGG GCCGCGAGCT CGATCTCGCC
AAGCCGTTCC ATCGCCTGAC GATCACGCAG GCGATCCAGA AATACGCGCC GAACTACACG
GACGGTCAGT TGTCGGACGA CGCGTTCCTG CGCGGCGAAC TCAAGCGGCT GGGCGTCGAC
GTCACGCAGC CGGCGTTCCT GAACGCCGGC ATCGGCGCGC TGCAGCTCGC GCTCTTCGAG
GAAACCGCCG AAGCGCAGCT GTGGGAACCG ACCTTCATCA TCGACTACCC GATCGAGGTG
TCGCCGCTCG CGCGCGAATC GGACACGGTG GCGGGCATCA CCGAGCGCTT CGAGCTGTTC
GTCACCGGCC GCGAAATCGC GAACGGCTTC TCGGAACTGA ACGACCCCGA AGACCAGGCC
GCGCGCTTCA GGAAGCAGGT CGAGCAGAAG GACGCGGGCG ACGAAGAGGC GATGTTCTTC
GACGCCGACT ACATCCGCGC GCTCGAATAC GGAATGCCGC CGACAGGCGG CTGCGGGATC
GGCATCGACC GGCTCGTGAT GCTGCTGACC GACAGCCCGA CGATTCGCGA CGTGCTGCTG
TTCCCGCACC TGCGCCGCGA AGACTGA
|
|---|
| Protein sequence | MTEPTQPQAA VAADENQIVA ERRDKLRALR DQGIAYPNDF QPTHHAAGLQ TEYADADKEA
LDAKALDVAV AGRMMLKRVM GKASFATVQD GSGQIQFFVT PADVGAETYD AFKKWDLGDI
VAARGVLFRT NKGELSVKCT ELRLLAKALR PLPDKFHGLA DQETRYRQRY VDLIVTPETR
ATFRARTKAI ASIRKFMSDA DFMEVETPML HPIPGGAAAK PFVTHHNALD MQMFLRIAPE
LYLKRLIVGG FERVFEINRN FRNEGVSPRH NPEFTMMEFY AAYTDYRWLM DFTERLIRQA
AVDALGTATI RYQGRELDLA KPFHRLTITQ AIQKYAPNYT DGQLSDDAFL RGELKRLGVD
VTQPAFLNAG IGALQLALFE ETAEAQLWEP TFIIDYPIEV SPLARESDTV AGITERFELF
VTGREIANGF SELNDPEDQA ARFRKQVEQK DAGDEEAMFF DADYIRALEY GMPPTGGCGI
GIDRLVMLLT DSPTIRDVLL FPHLRRED
|
|---|
| |