Gene BMASAVP1_A2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2194 
SymbolkdsA 
ID4682005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2175743 
End bp2176597 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID639846458 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_993506 
Protein GI121600604 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.191864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCG CCGGGTTCGA AGTCGGGCTC GACAAGCCGT TCTTCCTGAT CGCCGGCACC 
TGCGTCGTCG AATCGGAGCA GATGACGATC GACACCGCGG GCCGGCTGAA GGAGATCTGC
GCGACGCTCG GCGTGCCGTT CATCTACAAA TCGTCGTACG ACAAGGCCAA TCGCAGCTCG
GGCAAGTCGT TTCGCGGGCT CGGGATGGAC GAGGGGCTGC GGATTCTCGC CGAGGTGAAG
CGCCAGCTGA ACGTGCCGGT GCTCACCGAC GTGCACGAGA TCGACGAGAT CGCGCCCGTG
GCGGCCGTCG TCGACGTGCT GCAGACGCCC GCGTTCCTGT GCCGCCAGAC CGATTTCATC
CGCGCGTGCG CGCAATCGGG CAAGCCCGTG AACATCAAGA AGGGCCAGTT CCTCGCGCCG
CACGACATGA AGAACGTGAT CGACAAGGCG CGCGACGCCG CGCGCGACGC GGGGCTCTCG
GAAGACCGTT TCATGGCGTG CGAGCGCGGC GTGTCGTTCG GCTACAACAA TCTCGTGTCG
GACATGCGAT CGCTCGCGAT CATGCGCGAG ACGGGCGCGC CCGTCGTGTT CGACGCGACC
CACTCGGTAC AACTGCCGGG CGGGCAGGGC ACGAGCTCCG GCGGCCAGCG CGAATTCGTG
CCGGTGCTCG CGCGCGCGGC GCTCGCCACG GGCGTCGCGG GGCTTTTCAT GGAGACGCAT
CCGAATCCGG CCGAGGCCAA GTCCGACGGC CCGAACGCGG TGCCGCTCGG CAGGATGGCC
GCGCTGCTGG AGACGCTCGT CACGCTCGAT CGGGCGGTGA AGCGCGTGCC GTTCCTGGAA
AACGATTTCA ATTGA
 
Protein sequence
MNLAGFEVGL DKPFFLIAGT CVVESEQMTI DTAGRLKEIC ATLGVPFIYK SSYDKANRSS 
GKSFRGLGMD EGLRILAEVK RQLNVPVLTD VHEIDEIAPV AAVVDVLQTP AFLCRQTDFI
RACAQSGKPV NIKKGQFLAP HDMKNVIDKA RDAARDAGLS EDRFMACERG VSFGYNNLVS
DMRSLAIMRE TGAPVVFDAT HSVQLPGGQG TSSGGQREFV PVLARAALAT GVAGLFMETH
PNPAEAKSDG PNAVPLGRMA ALLETLVTLD RAVKRVPFLE NDFN