Gene BMASAVP1_A2160 details

Gene Information

• Locus tag: BMASAVP1_A2160
• ID: 4679881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2147801
• End bp: 2148523
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639846424
• Product: TPR domain-containing protein
• Protein accession: YP_993472
• Protein GI: 121598689

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTT CCCGCGGCCG CGCGCCGAGC GCTGCGACCC TTGTTGCGAC CGCCGCCGTG 
AGCGCCGCGC TCGCGCTCCT TCCGGGCGCG GCGGCCCTTG CGCAGAAAGC GCCCGCCCCC 
ACCGACGGCA CGCCGGAAAT CGACGCGTCG ATCACGAATC GCAACTGGGC GCAGGCGCTC 
GCGCAGCTCG ACGCGCGCAT CGCGTCGAAC CCGCGCGACG TGCAGGCGCA GTTCAAGCGC 
GGCACCGTGC TCGCACGGCT GAACCGCGAC GACGACGCGA TCAAGCAGTT CGTCGAGCTG 
ACGCAAGCCT ATCCGGAACT GCCGGAACCC TACAACAACC TGGCGGCGCT CTACGCGAAG 
CACGGCCGCT ACGACGACGC GCGCAGCGCG CTCGTCACGG CGACGCACGC GAACCCGAAC 
TACGGGCTTG CGTACGAGAA CCTCGGCGAT CTCTACCTGC GCCTCGCGGC CGAATCGTAC 
AAGCGCGCGC AGTCGCTCGG CCGCACGACG GGCGCGAGCG CGCAACGCCT GTCGGATCTG 
CAGAAGATCA TCGCGCCGCC GAAGACGAGG GCGGCCGCCG CGCCGGCCCC GGCCGCGCGC 
GACTATTCGG CGCGAGCCGC CGCGAACGTG ACGACCACCA CGCTGCCGCT GTCCCCGACG 
TTCCAGTTCG GCGGCCCGAG CGGCATGCTC GCGATGCCGC CTTACGCCGC GCCGTCACAA 
TGA 

 

Protein sequence

MKPSRGRAPS AATLVATAAV SAALALLPGA AALAQKAPAP TDGTPEIDAS ITNRNWAQAL 
AQLDARIASN PRDVQAQFKR GTVLARLNRD DDAIKQFVEL TQAYPELPEP YNNLAALYAK 
HGRYDDARSA LVTATHANPN YGLAYENLGD LYLRLAAESY KRAQSLGRTT GASAQRLSDL 
QKIIAPPKTR AAAAPAPAAR DYSARAAANV TTTTLPLSPT FQFGGPSGML AMPPYAAPSQ