| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2145 |
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| Symbol | |
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| ID | 4680192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 2132180 |
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| End bp | 2135326 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639846409 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_993458 |
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| Protein GI | 121599973 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.536412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGA ACCTGTTCGC GGTGTTCATC CGCTACCCGG TCGCCACCTG CCTGATGACG
GCGGGCATCC TGTTCGCGGG CGTGGCCGCG TATTTTCATC TGCCCGTCGC GCCGCTGCCG
CAGGTCGAGT TCCCGACCAT CCAGGTTTCG GCCGTTCTGC CGGGCGCCGA TCCTGTATCG
GTCGCCTCGA CGCTCGCGCA GCCGCTCGAG ACGCAGTTCT CGAAGATTCC GTACGTCACG
CAGATGACGT CGCAAAGCAC GCTCAGCTCG ACGTCGATCG TGCTGCAGTT CAGTCTCGAG
CGCAGCATCG ACGCGGCCGC CAACGACGTG CAGTCCGCGA TCGACGCGGC GGCCGCGCAA
TTGCCGGCGG ATCTCCCCTC GCCGCCGACG TTCCAGAAGG TCAACCCGGC CGACTCGCCG
ATCATGCTGC TGAGCGCGAT ATCGTCGACG CTGCCGCTCA CGACGATCGA CGACTATGTC
GAGACGCGAC TCACGAAAAG CCTGAGCCAG ATCGACGGCG TCGGCAGCGT GTCGATCGGC
GGCCAGCAGA AGCCGTCGAT CCGCATCCAG CTCGATCCGG TCAAGCTCGC GTCGCGCGGG
CTGTCGTCCG AGGACGTGCG CCGCGCACTG TCGGGGCTGT CGGGCGTGAA TCCGAAAGGC
GTGTTCAACG GCACGACGCG CTCGTACACG ATCTACACGA ACGGGCAGCT GACCGAGCCG
GCGCAGTGGA ACGACGCGAT CGTCGCGTAC CGGGACGGCA CGCCGGTGCG CATCCGCGAC
ATCGGGCAAG CGGTGCTCGG CCCCGAGGAC AACACGCTCG CCGCATGGAT CGACGGCCGG
CGCGCGATCT CGGTCGGCAT CTACAAGAAG CCCGGCGCGA ACACCGTCTC GACCGTCGAC
AAGATCCGTG CCAGGCTGCC CGAACTCGAG GCGTCGCTGC CGCCGTCGCT GAAGATCGCC
GTGCTGGCCG ACCGCACGCA GACGATCCGC GCATCGCTGC TCGACATCGA GCTCACGCTG
CTGCTGAACG TCGTGCTCGT CGTCGTCGTG ATCTACGCAT TTCTCGGCAG CGTGCGCACG
ACGATCATCC CGGCCGTCAC GGTGCCCGTG TCGCTGTTCG GCGCGTGCGC GCTGATGTGG
GTGTGCGGGT ACAGCCTCGA CAACATCTCG CTGATGGCGA TGACGATCGC GGTCGGCTTC
GTCGTCGACG ACGCGATCGT GATGGTCGAG AACATCGCGC GCCACGTCGA GGCCGGCGAG
CTGCCGCTGC AGGCCGCGCT CAAGGGGCTG AGCGAAACGA GCTTCACGAT CGCGTCGATC
AGCCTCTCGC TCGTCGCGGT GCTGCTGCCG CTGCTGCTGA TGAGCGGCAT CATCGGCCGC
ATGTTCCGCG AGTTCGCCGT CACGCTGTCG ATGACGATCA TCGTGTCCGC GTTCGTCTCG
CTGACGCTCA CGCCGATGAT GGCGTCGTAC CTGCTGCGCG CGCATCGCCA CGACGCAGGG
CGCCCGCCGC GGCCCGGCCT CTTCGAGCGC GCGTTCGCGC GAACGGCGGC CGCGTACGAG
CGCGCGCTCG ACGTCGCGCT GCGGCACCGT TTCGTCACGC TGTGCGCGTT CCTCGCGTCG
GTCGCGGCCT CGGTGTTTCT CTACGTCGGG ATTCCGAAAG GCTTTTTCCC GCAGCAGGAC
ACGGGCGTGA TCACCGGCAT TTCGGAGGCC GCGCAGACCA TTTCGGTCGA GGACATGGCG
CGCCACTCGA TGGCGCTCGC GGCGATCATC CGCGCCGACC CCGCCGTCGA GCATTGTCAG
ATGGCGGTCG GCGGCAGCGC GTATGCGGGC ACGACCGTGA ACAACGGCCG CTGGTACATC
ACGCTGAAGC CGCGCGATCA GCGCGACGCC ACCGCCGACG AGGTGATCCG CCGGCTGCGG
CCGCAGTTCG CGAAAGTGCC CGGCGTGCGC ATGTACCTGC AGGCCGCGCA GGACGTGATC
ATCGGCGCGC GCCTCGCGCG CACCCAATAC CAGCTGACGC TGCAAAGCGC CGATGTCGGC
GCGCTGACGA CGTGGGCGCC GCGCCTGCTC GCGCGGCTGT CCGGGCTGCC GCAGTTGCGC
GATGTCGCGA GCGACCAGCA GGTGAACGGC TCGGCGCTCA GCGTCGCGAT CGACCGCGAT
CAGGCCGCGC GTTACGGCCT CACGCCCGAG GCGATCGACG GCACGCTGTA CGACGCGTTC
GGCTCGCGCC AGGTCGCGCA ATACTTTACG CAGTTGTCGA CCTACAAGGT CATCATGGAA
ACGCTGCCGT CCCTGCAGCG CGACCCGGGC ACGCTCGACA GGATCTACAT GAAAGCGCCG
TCGGGCGCGC TGGTGCCGCT GTCGTCGGTC GCGCGCTGGA CGACCGACAC GGTGCAGCCG
CTGTCGGTCA ATCACCAGTC GCATTTCCCG TCGGTCACGA TCAGCTTCAA CCTCGCGCCG
GGCGTCTCGC TCGGCGAGGC GACGGCCGCG ATCGAGGCCG CGCGGGCCTC GCTGCGCATG
CCGCCCGCCG TCGTCGGCTC GTTCCAGGGC ACCGCTCAGG CGTTCCAGAG CACGCTCGCG
ACGATGCCGA TGCTGATCCT GTCCGCGCTG ATCGTCGCGT ACCTGGTGCT CGGCGCGCTG
CACGGCAGCT TCATCCATCC GTGGACGATC CTGTCGACGC TCCCGTCGGC CGGTGTCGGC
GCGATCGCGA CGCTGTGGCT GTTCAAGTAC GACTTCAACC TGATCGCGCT GATCGGCGTG
ATTCTCCTCA TCGGCATCGT CAAGAAGAAC GGAATCATGA TGGTCGACTT CGCGATCGCC
GCGACGCGCG AGCGGAACAT GACATCGCTC GACGCGATCC GCAGCGCGTG CCTGCTGCGC
TTGCGGCCGA TCATGATGAC GACGATGACC GCGCTGTTCG GCGCGCTGCC GCTCATGTTC
ACGCCCGGCA TGGGATCGGA GCTGCGGCAG CCGCTCGGCT ACGCGATGGT GGGCGGACTG
CTGGTGAGCC AGGTGCTCAC GCTGTTTACG ACGCCCGTCA TCTATCTGTA TCTCGATACG
CTGTCGAACC GTCTGAAGGC GCGCTTGCGT CCGCTCGGCG CCGACATGCC GTCGAACGCG
CACGTGGAGG GCCCGACCCA GGACTGA
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| Protein sequence | MSRNLFAVFI RYPVATCLMT AGILFAGVAA YFHLPVAPLP QVEFPTIQVS AVLPGADPVS
VASTLAQPLE TQFSKIPYVT QMTSQSTLSS TSIVLQFSLE RSIDAAANDV QSAIDAAAAQ
LPADLPSPPT FQKVNPADSP IMLLSAISST LPLTTIDDYV ETRLTKSLSQ IDGVGSVSIG
GQQKPSIRIQ LDPVKLASRG LSSEDVRRAL SGLSGVNPKG VFNGTTRSYT IYTNGQLTEP
AQWNDAIVAY RDGTPVRIRD IGQAVLGPED NTLAAWIDGR RAISVGIYKK PGANTVSTVD
KIRARLPELE ASLPPSLKIA VLADRTQTIR ASLLDIELTL LLNVVLVVVV IYAFLGSVRT
TIIPAVTVPV SLFGACALMW VCGYSLDNIS LMAMTIAVGF VVDDAIVMVE NIARHVEAGE
LPLQAALKGL SETSFTIASI SLSLVAVLLP LLLMSGIIGR MFREFAVTLS MTIIVSAFVS
LTLTPMMASY LLRAHRHDAG RPPRPGLFER AFARTAAAYE RALDVALRHR FVTLCAFLAS
VAASVFLYVG IPKGFFPQQD TGVITGISEA AQTISVEDMA RHSMALAAII RADPAVEHCQ
MAVGGSAYAG TTVNNGRWYI TLKPRDQRDA TADEVIRRLR PQFAKVPGVR MYLQAAQDVI
IGARLARTQY QLTLQSADVG ALTTWAPRLL ARLSGLPQLR DVASDQQVNG SALSVAIDRD
QAARYGLTPE AIDGTLYDAF GSRQVAQYFT QLSTYKVIME TLPSLQRDPG TLDRIYMKAP
SGALVPLSSV ARWTTDTVQP LSVNHQSHFP SVTISFNLAP GVSLGEATAA IEAARASLRM
PPAVVGSFQG TAQAFQSTLA TMPMLILSAL IVAYLVLGAL HGSFIHPWTI LSTLPSAGVG
AIATLWLFKY DFNLIALIGV ILLIGIVKKN GIMMVDFAIA ATRERNMTSL DAIRSACLLR
LRPIMMTTMT ALFGALPLMF TPGMGSELRQ PLGYAMVGGL LVSQVLTLFT TPVIYLYLDT
LSNRLKARLR PLGADMPSNA HVEGPTQD
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