| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2091 |
|---|
| Symbol | dehII-2 |
|---|
| ID | 4678939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 2070925 |
|---|
| End bp | 2071728 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639846355 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_993407 |
|---|
| Protein GI | 121598220 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00337197 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTGG AGCGCAACGT CATGCCCGGC ACCCCGCCCG CCTTCCCGAA GGCGATTCTC
TTCGACGCGT ACGGCACGCT GTTCGACGTG CACGCGGTCG TCGCCGCGGC CGAGCAGCTG
TTTCCGGGGC GCGGCGACGC GCTGTCGCAG CTCTGGCGGC GCAAGCAGAT CGAATATTCG
CAACTGCGCA CGCTCGCCGA TCCGGCGGGC GGGCGCTATC GGCCGTTCTG GGAGCTGACG
CTCGACGCGC TGCGCTTTGC CGCGCGCGCG CTCGGCCTCG CGCTGTCCGC GGCCGCCGAG
AAAAGACTGA TGGACGAGTA TGCGTGCCTG TCGACGTACC CGGACACGGT GCCGACGCTG
CGCGCGCTGC GTGCGCGCAG CACGCCGCCG AAGCTCGCGA TCCTGTCGAA CGGCAATCCG
CAGATGCTCG ATATCGCGGT CAAGAGCGCC GGGATGAGCG GCCTGTTCGA CCGCGTGCTG
TCCGTCGACG CGGTTCGCGC GTACAAGCCG TCGCCCGCCG CGTATGCGCT CGGCACCGCG
GCGTTCGACG CGGCCCCCGC CGACATCGCA TTCGTGTCGT CGAACGGCTG GGACGTCGCG
GGCGCCGGCT GGTTCGGCTA CCGGACCTTC TGGCTGAACC GCACGGGCGC GCCGCTCGAG
GAGCTCGGCG CGGCGCCCGC GGGCACGGGC GCCGGCATGG CCGAACTGCT CGCCTTTCTC
GACGCGCCGC GCGCCGCCGC GAAAGCGGGC GGCCGAGCGC GCCCGGCGCC CCGCGTAAGC
CGCCTCGGCG CGCCGCCGAC CTGA
|
|---|
| Protein sequence | MIVERNVMPG TPPAFPKAIL FDAYGTLFDV HAVVAAAEQL FPGRGDALSQ LWRRKQIEYS
QLRTLADPAG GRYRPFWELT LDALRFAARA LGLALSAAAE KRLMDEYACL STYPDTVPTL
RALRARSTPP KLAILSNGNP QMLDIAVKSA GMSGLFDRVL SVDAVRAYKP SPAAYALGTA
AFDAAPADIA FVSSNGWDVA GAGWFGYRTF WLNRTGAPLE ELGAAPAGTG AGMAELLAFL
DAPRAAAKAG GRARPAPRVS RLGAPPT
|
|---|
| |