Gene BMASAVP1_A2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2078 
Symbolalr 
ID4680322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2055650 
End bp2056720 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID639846342 
Productalanine racemase 
Protein accessionYP_993394 
Protein GI121600921 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.295306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC CGATTTCCGC CACGATCCAC ACCGCAGCTC TCGCGAACAA CCTCTCCGTC 
GTGCGCCGCC ACGCCGCCCA GTCGAAGGTC TGGGCGATCG TCAAGGCGAA CGCGTACGGG
CACGGTCTCG CGCGCGTCTT TCCCGGGCTG CGCGGCACCG ACGGCTTCGG CCTGCTCGAC
CTCGACGAGG CCGTGAAGCT GCGCGAACTG GGCTGGGCGG GGCCGATCCT GCTGCTCGAG
GGCTTCTTCC GGTCGACCGA CATCGACGTG ATCGACCGCT ACAGCCTGAC GACCGCGGTG
CACAACGACG AGCAGATGCG CATGCTCGAG ACCGCGCGGC TGTCGAAGCC CGTGAACGTC
CAGCTGAAGA TGAACAGCGG CATGAACCGG CTCGGCTACA CGCCCGAGAA GTACCGGGCC
GCCTGGGAGC GCGCGCGCGC ATGCCCGGGC ATCGGCCAGA TCACGTTGAT GACCCATTTT
TCGGACGCCG ACGGCGAACG CGGCGTGGCC GAGCAGATGG CGACGTTCGA GCGCGGCGCG
CAAGGCATCG CCGGCGCGCG CAGCTTCGCG AACTCGGCCG CCGTGCTCTG GCACCCGTCG
GCGCACTTCG ACTGGGTGCG GCCCGGCATC ATGCTGTACG GCGCGTCGCC GTCCGGCCGT
GCGGCGGACA TCGCCGACCG GGGCCTGAAG CCGACGATGA CGCTCGCCTC CGAGCTGATC
GCCGTGCAGA CGCTCGCGAA AGGGCAGGCG GTCGGCTACG GATCGATGTT CGTCGCCGAG
GACACGATGC GCATCGGCGT CGTCGCGTGC GGCTATGCGG ACGGCTATCC GCGGATCGCG
CCCGAGGGCA CGCCCGTCGT CGTCGACGGC GTGCGCACGC GGATCGTCGG CCGCGTGTCG
ATGGACATGC TGACCGTCGA TCTCACGCCC GTGCCGCAGG CGGGCGTCGG CGCGCGCGTC
GAGCTGTGGG GCGAGACGCT GCCGATCGAC GACGTCGCCG CGCGTTGCAT GACGGTCGGC
TACGAGCTGA TGTGCGCGGT CGCGCCGCGC GTGCCCGTGC GTGCCGAGTA A
 
Protein sequence
MPRPISATIH TAALANNLSV VRRHAAQSKV WAIVKANAYG HGLARVFPGL RGTDGFGLLD 
LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTAV HNDEQMRMLE TARLSKPVNV
QLKMNSGMNR LGYTPEKYRA AWERARACPG IGQITLMTHF SDADGERGVA EQMATFERGA
QGIAGARSFA NSAAVLWHPS AHFDWVRPGI MLYGASPSGR AADIADRGLK PTMTLASELI
AVQTLAKGQA VGYGSMFVAE DTMRIGVVAC GYADGYPRIA PEGTPVVVDG VRTRIVGRVS
MDMLTVDLTP VPQAGVGARV ELWGETLPID DVAARCMTVG YELMCAVAPR VPVRAE