Gene BMASAVP1_A2075 details

Gene Information

• Locus tag: BMASAVP1_A2075
• ID: 4678973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2051805
• End bp: 2053745
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639846339
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_993391
• Protein GI: 121600971
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.491633
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCGTT TCAATCAGTT CAGCCTCGCC CGCGGCACGA AGCCGCTCTT CGACGCGACC 
TCGTTCACGC TGAATCCCGG CGAGAAGGCG GGCCTCGTCG GCGCGAACGG CGCCGGCAAA 
TCGACGCTCT TCGCGGTGCT GCGCGGCGAG CTGCACGCGG ACGCGGGCGA CTTCTCGATG 
CCGCCGGCGT GGCGCATCGC GCACGTGTCG CAGGAAACGC CCGCCGTCGA GCGCAGCGCG 
CTCGACTACA CATTGGACGG CGACGCCGCG TTGCGCGCGA TCGAGGCGCG CATCGCGCAG 
GCGTCCGCCG CGCACGACGG CGCAGCCGAG GCCGACGCGC ACGCGGCGTT CGCGGACGCC 
GACGGCTACA CCGCGCCCGC GCGCGCCGAG GCGCTGCTGC TCGGGCTCGG CTTCACGCTC 
GCGCAGACGC GCGAGCCCGT CGCGAGCTTC TCGGGCGGCT GGCGCATGCG CCTGAATCTC 
GCGCAGGCGC TGATGTGCCG CTCGGATCTG CTGCTGCTCG ACGAGCCGAC GAACCACCTG 
GATCTCGACG CGATCGTCTG GCTCGAAGAC TGGCTGCATC GCTATCCGGG CACGCTCGTC 
ATCATCTCGC ACGATCGCGA ATTCCTCGAC GCCGTCTGCG ACGTGACGCT GCATCTCGAG 
AATCGCCAGG TGAAGCGTTA CGGCGGCAAC TACTCGCAGT TCGAAGTGCT GCGCGCGCAG 
CAGCTCGAAT TGCAGCAAAG CGCATACGAA AAGCAGCAGA AGACGATTGC GCATCTGCAG 
AGCTTCGTCG ACCGCTTCAA GGCGAAGGCG TCGAAGGCGA AGCAGGCGCA AAGCCGGGTG 
AAGGCGCTCG AGAAGATGGA GCGGATCGCG CCCGCGCACA TCGCTTCGCC ATCCACGTTC 
GAATTCCGCA CGCCCGATTC CGCGCCGAAC CCGATGCTCG TGATGGAAAA CGTGCGCTGC 
GGCTACCGCG CGGACGACGG CGGCGAAATC CCGATCGTCG AGCGCGTCGC GCTGTCGATC 
CAGAACGGCC AGCGCATCGG CCTGCTCGGC GCGAACGGCC AGGGCAAGTC GACGCTCATC 
AAGACGCTCG CGGGCACGCT CGCGCCGCTG TCGGGCGAGC TGCGCACCGG CCGCGGGCTC 
ACGATCGGCT ATTTCGCCCA GCACCAGCTC GAGACGCTGC GCGAGGACGA TTCGGCGCTC 
GCGCATCTCG CGCGCCTCGC CCCGGACACG CGCGAGCAGG AACTGCGCGA CTTTCTCGGC 
GGCTTCAACT TCTCCGGCGA GATGGCGACC GCGCCGATCG CGCCGTTCTC CGGCGGCGAG 
AAAGCGCGGC TCGCGCTCGC GCTGATCATC TGGCGGAAGC CGAACCTGCT GCTGCTCGAC 
GAGCCGACGA ACCACCTCGA TCTGGAAACG CGCCACGCGC TCACGATGGC ACTCGCGCAA 
TTCGAGGGCA CGCTGATCCT CGTGTCGCAC GACCGTCACC TGCTGCGCGC GACGACCGAC 
CAGTTCATGC TGGTCGCGAA GCACCGGCTG CAGCCGTTCG ACGGCGATCT CGACGACTAC 
CGCGACTGGC TGCTGCAGCA CGCGGCCGAA CAGCGCGCGG CGGCGAAGGC AGCCTGCGGC 
CCGGCGGGCG ACGCCGACGG CGGCGCGCCC GCCGTGAATC GCAAGGACCA GAAACGGCAG 
GAAGCCGAAG CGCGCCAGCG TCTGTCGCAG CTGAAGAAAC CGCTGCAGGC GCGGATCACG 
AAGATCGAGA AGGAAATGGA GCGGCTGCAC GCGCAGAAGG CGGAGCTCGA CGCGTTCGTC 
GCCGATCCGG CGAGCTATGC GGCGGACCAG AAGACGCGGC TCACCGAGGC GATCCGCAAG 
CTCGGCGACG TCAACGGCCA GCTCGAAACG CTCGAGGCGG ACTGGCTCGG CGCGCAGGAC 
GAGCTGGAAA AAATCGGGTG A 

 

Protein sequence

MIRFNQFSLA RGTKPLFDAT SFTLNPGEKA GLVGANGAGK STLFAVLRGE LHADAGDFSM 
PPAWRIAHVS QETPAVERSA LDYTLDGDAA LRAIEARIAQ ASAAHDGAAE ADAHAAFADA 
DGYTAPARAE ALLLGLGFTL AQTREPVASF SGGWRMRLNL AQALMCRSDL LLLDEPTNHL 
DLDAIVWLED WLHRYPGTLV IISHDREFLD AVCDVTLHLE NRQVKRYGGN YSQFEVLRAQ 
QLELQQSAYE KQQKTIAHLQ SFVDRFKAKA SKAKQAQSRV KALEKMERIA PAHIASPSTF 
EFRTPDSAPN PMLVMENVRC GYRADDGGEI PIVERVALSI QNGQRIGLLG ANGQGKSTLI 
KTLAGTLAPL SGELRTGRGL TIGYFAQHQL ETLREDDSAL AHLARLAPDT REQELRDFLG 
GFNFSGEMAT APIAPFSGGE KARLALALII WRKPNLLLLD EPTNHLDLET RHALTMALAQ 
FEGTLILVSH DRHLLRATTD QFMLVAKHRL QPFDGDLDDY RDWLLQHAAE QRAAAKAACG 
PAGDADGGAP AVNRKDQKRQ EAEARQRLSQ LKKPLQARIT KIEKEMERLH AQKAELDAFV 
ADPASYAADQ KTRLTEAIRK LGDVNGQLET LEADWLGAQD ELEKIG