| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A2052 |
|---|
| Symbol | uppS |
|---|
| ID | 4681074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 2025432 |
|---|
| End bp | 2026214 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639846316 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_993368 |
|---|
| Protein GI | 121598838 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATA CCAGCTCTAC CGTTCGCGTG CCTGACGTCG CCGCCGTGCC GCGTCACATC
GCGATCATCA TGGACGGCAA CGGCCGTTGG GCGACCGAGC GCCGCCTGCC GCGCGTCGCG
GGGCACACGC GCGGCGTCGA CGCGGTGCGC TCGGTCGTCG AGGGATGCGC ACGCGCGGGC
GTCGAATATC TGACGCTCTT CGCGTTCAGC TCCGAGAACT GGCGCCGGCC GAACGACGAA
GTGTCGTTCC TGATGCGCCT GTTCATCACC GCGCTCGAGC GCGAGGTCGG CAAGCTGCAC
GCGAACGGCA TCCGGCTGCG CGTCGTCGGC GATCTGACGA AGTTCGAGCC GCGCATCCAG
GCGCTGATTC GTCGCGGCGA GACGAAGACG GCGCGCAATA CGCGCCTCAC GCTCACGATC
GCCGCGAACT ACGGCGGCCA TTGGGACATC CTGCAGGCGA CGCGCAAGCT CGTCGAAGAG
GCGGCGCGCG AAGGGCGCGC GCCCGAAATC GACGAGGACG CGTTCGCCCG CCATCTGGCG
ATGGCCTATG CGCCCGAGCC GGATCTCTTC ATCCGCACGG GCGGCGAGCA GCGCATCAGC
AATTTCCTGC TCTGGCAGCT CGCCTATACC GAGTTCTACT TCACCGACAC GTTCTGGCCG
GATTTCGACG CCGGCGCGCT CGCCGAAGCG CTCGCGTCGT ACACGCACCG CGAACGCCGC
TTCGGCCGCA CGAGCGCGCA GCTCGAACCC CAGGCCCAGG ACGCCGATTC CCTTTCATGC
TGA
|
|---|
| Protein sequence | MTYTSSTVRV PDVAAVPRHI AIIMDGNGRW ATERRLPRVA GHTRGVDAVR SVVEGCARAG
VEYLTLFAFS SENWRRPNDE VSFLMRLFIT ALEREVGKLH ANGIRLRVVG DLTKFEPRIQ
ALIRRGETKT ARNTRLTLTI AANYGGHWDI LQATRKLVEE AAREGRAPEI DEDAFARHLA
MAYAPEPDLF IRTGGEQRIS NFLLWQLAYT EFYFTDTFWP DFDAGALAEA LASYTHRERR
FGRTSAQLEP QAQDADSLSC
|
|---|
| |