Gene BMASAVP1_A2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2041 
SymbolrnhB 
ID4680211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand- 
Start bp2014679 
End bp2015323 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID639846305 
Productribonuclease HII 
Protein accessionYP_993357 
Protein GI121600420 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00230414 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGA CGCGCAAACC CCGCGGCGGC GCTGGCGGCG CGACCCAGCC CGCGCTCGAT 
TTCGACGCGC CGGGCGAGAT CGTCTGCGGC GTCGACGAAG CCGGGCGCGG CCCGCTCGCC 
GGGCCCGTCG TCGCGGCGGC CGTCGTGCTC GATCCGGCGC GGCCGATCGT CGGCCTCGAC 
GATTCGAAGG CGTTGTCCGC GAAGAAGCGC GAGCGGCTCT TCGACGAAAT CGTCGCGTAT 
GCGCTCGCGT ACAGCGTCGC CTCGGCGAGC GTCGAGGAAA TCGACAGCCT CAACATCCTG 
CATGCGACGA TGCTCGCGAT GAAGCGCGCA GTCGAAGGGC TCTCGGTGCT GCCGACGCTC 
GCGAAGATCG ACGGCAACCG CTGCCCGATG CTCGCGATCC GCAGCGAAGC GATCGTCGGC 
GGCGACGCGC TTGTGCCGAG TATCTCGGCC GCGTCGATCC TCGCGAAGGT CACGCGCGAC 
CGGATGCTCG TCGAACTGCA TCAGCAGTTT CCGATGTACG GTTTCGATGC GCACGCGGGC 
TACGGCACGC CGCAGCATCT GGCCGCCTTG CGCGAGCATG GGCCGTGCGA GCATCATCGC 
CGCTCGTTCG CGCCGGTGCG CGAAGCCTTC GATCTGATTC GATGA
 
Protein sequence
MATTRKPRGG AGGATQPALD FDAPGEIVCG VDEAGRGPLA GPVVAAAVVL DPARPIVGLD 
DSKALSAKKR ERLFDEIVAY ALAYSVASAS VEEIDSLNIL HATMLAMKRA VEGLSVLPTL 
AKIDGNRCPM LAIRSEAIVG GDALVPSISA ASILAKVTRD RMLVELHQQF PMYGFDAHAG 
YGTPQHLAAL REHGPCEHHR RSFAPVREAF DLIR