Gene BMASAVP1_A2034 details

Gene Information

• Locus tag: BMASAVP1_A2034
• ID: 4680959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: -
• Start bp: 2005659
• End bp: 2006093
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639846298
• Product: NfeD family protein
• Protein accession: YP_993350
• Protein GI: 121600570
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.10928
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTATCGG GGCAGTTTTT CTGGTGGATC GGCGTCGGCG TGTTCGTCGT CGCGGAGCTG 
CTGACGGGAA CGTTCTACCT GCTGATGATC GCGCTCGGCT TTCTCGCGGG CGGCCTCGCG 
CATCTGGCGG GCGTGCCCGC CGCGTGGCAA CTGGCCGCGG CCGCGCTCGT CGCGCTCGTC 
GCCGTGATCG CGCTCAGGCG CTCGGGGCTC GGCCGCAAGC AGAAGCGCGA CGCGGGCGCG 
AACCCCGACG TCAACCTCGA TATCGGCGCG ACGATCGAGG TCACGCATTG GCGCGACCGC 
CGGGCGCGCG CGCAGTATCG CGGCGCGCCG TGGGACGTCG AACTCGCGGC CGGCGAGCGC 
GAGGACGCGC ATCTGTATGA AGTGCGCGCG GTGCGGGGCA ATTGTCTGAT CGTCGCCGCG 
AAGCCGCCGG CGTGA 

 

Protein sequence

MVSGQFFWWI GVGVFVVAEL LTGTFYLLMI ALGFLAGGLA HLAGVPAAWQ LAAAALVALV 
AVIALRRSGL GRKQKRDAGA NPDVNLDIGA TIEVTHWRDR RARAQYRGAP WDVELAAGER 
EDAHLYEVRA VRGNCLIVAA KPPA