Gene BMASAVP1_A2032 details

Gene Information

• Locus tag: BMASAVP1_A2032
• Symbol: smpB
• ID: 4681752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2004017
• End bp: 2004463
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639846296
• Product: SsrA-binding protein
• Protein accession: YP_993348
• Protein GI: 121601426
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.17643
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCA TCGACAATAG AAAAGCGTTC TTCGATTACC ACATCGAAGA ACGCTATGAA 
GCGGGGCTCG TGCTCGAGGG GTGGGAGGTC AAGGCGCTGC GCGCCGGGCG CGGCCAGATC 
AAGGAAGGCT ACGTCGTCGT GAAGCACGCG GAGATCTTCC TGATCGGCAC GCACATCAGC 
CCGCTGCCCG AAGCCTCGAC GCACATCAAG CCCGATCCCG TCCGCACCCG CAAGCTGCTG 
CTGCATCGCG ACGAGATCAA GAAGCTGATC GGCAAGGTCG AGCAGCGCGG TTATACGCTC 
GTGCCGCTGA ACTTCCATTA CAAGGGCGGC CGCGTGAAAT GCGAGATCGG CCTTGCGAAA 
GGCAAGAAAC TGCACGATAA GCGCGAGACC GAAAAGAAGC GCGATTGGGA GCGCGAGAAG 
GCGCGAATCA TGCGCTCGGC CACCTGA 

 

Protein sequence

MSIIDNRKAF FDYHIEERYE AGLVLEGWEV KALRAGRGQI KEGYVVVKHA EIFLIGTHIS 
PLPEASTHIK PDPVRTRKLL LHRDEIKKLI GKVEQRGYTL VPLNFHYKGG RVKCEIGLAK 
GKKLHDKRET EKKRDWEREK ARIMRSAT