Gene BMASAVP1_A2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2017 
Symbol 
ID4680021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp1992032 
End bp1992724 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID639846281 
Producthypothetical protein 
Protein accessionYP_993333 
Protein GI121599582 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.617631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAA CCGCGCTGCC GCGCGGCACG GTTGCGCTGT TCGCCGGTGC GAGCGGCTTG 
AGCGTGGCGA ACGTCTACTA TGCGCAGCCG CTTCTCGACG CGCTTGCCGC GGATTTCACG 
ATCGGCCGCG CGGCGATCGG CGGCGTCGTG ACCGCCACGC AAATCGGCTG CGCACTTGCG 
CTGCTGTTGC TCGTGCCGCT CGGCGACCTC GTCGACCGCC GCCGGCTGAT GCTCGTGCAA 
TCGCTCGCGC TCGCGGCGAC GTTGATCGCC GTCGGCTTCG CGTCGGCCAG CGCCGTGCTG 
ATCGCCGGCA TGCTTGGCAC AGGGCTGCTC GGCACGGCGA TGACCCAGGG GCTCGTATCG 
TACGCGGCGA GCGCCTCGGC CTCGCACGAG CGCGGGCGCG TGGTCGGCGC CGCGCAAGGC 
GGCGTCGTGA TCGGGCTGTT GCTCGCGCGC GTGCTGGCGG GCTTCGTCGG CGACGTGGCG 
GGATGGCGCG GCGTCTATTT CCTGTCGGCG GCCGCGATGC TCGCGCTCGC GGCGCTGCTC 
GCGCGCAAGC TGCCCGCGCT CGCGCCGGCA TCGCCGCGCA TCGGCTATCC GCGGCTGATC 
GCATCGCTGT TCGGCCTGCT GCGCGACGAG CACGTCTTGC AGATCCGCGG GATGCTCGCG 
ATGCTGATGT TCGCCGCGTT CAACATTTTC TGA
 
Protein sequence
MTQTALPRGT VALFAGASGL SVANVYYAQP LLDALAADFT IGRAAIGGVV TATQIGCALA 
LLLLVPLGDL VDRRRLMLVQ SLALAATLIA VGFASASAVL IAGMLGTGLL GTAMTQGLVS 
YAASASASHE RGRVVGAAQG GVVIGLLLAR VLAGFVGDVA GWRGVYFLSA AAMLALAALL 
ARKLPALAPA SPRIGYPRLI ASLFGLLRDE HVLQIRGMLA MLMFAAFNIF