| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1981 |
|---|
| Symbol | |
|---|
| ID | 4681376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1958264 |
|---|
| End bp | 1959601 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639846245 |
|---|
| Product | sensor histidine kinase RisS |
|---|
| Protein accession | YP_993297 |
|---|
| Protein GI | 121598604 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0389833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGCTCG TGTTCGGCGG GCTGTTCTGG CGCACCTTCC TGCTGATCGC GCTGTTGATC
GCAGTCAGCC TCGCCGCGTG GTTCCAGAGC TTCCGAGTGA TCGAGCGCGA GCCGCGCGCG
CAGCGCGTCG CGCTGCAGCT CGTCGCCATC GTGAAGCTCA CGCGCACGGC CCTGCTCTAT
TCCGATCCCG ATCTGCGCCG CGCGCTGCTG CAGGATCTCG AGAGCAACGA AGGCGTGCGC
GTCTATCCGC GCGAGAAAAC CGACAAATTC AAGCTGCAGC CCGACGAATC GGTGAACCGG
CTGATCGAGC ACGACATCCG CAGCCGCCTG GGCGACGACA CGGTGATCGC GCAATCGGTC
AACGACATCC CCGGCGTGTG GATCAGCTTC AAGATCGACG ACGACGACTA TTGGGTCGCG
CTCGACCGCG ATCAGCTCGA TACCGTCACC GGCCTGCAAT GGGCCGGCTG GGGCCTCTTC
GCGCTCGCGC TGTCGCTGAT CGGCTCGGCG TTCATCACGA GCCTCGTGAA CCAGCCGTTC
TCGCGGCTCG CGCTCGCCGC CCGCAAGGTG GGCTCCGGCC AAACGCCGGA ACCGCTGCCC
GAGCGGGGAA TGGGCGTCGC CACAGAGACG AACCGCAGCT TCAACCAGAT GGTTCGCGAC
CTCGAGCAGC TCGAGGCCGA TCGCGCGCTG ATGCTCGCGG GGATCTCGCA CGATCTGCGC
ACGCCGCTCG CGCGGCTGCG CCTCGAAACC GAAATGAGCC CGTCCGACCA GGCGACGAAG
GACGCGATGG TCGACGACAT CGAGCAGATG GACCGCATCA TCGCCGCGTT CATCGATTAC
GCGCGCCCCG CGCAGCGCAC GCCGGAGCCC GTCGATCTGT CGCAGGTCGC CCGCGAGGTT
GCCGCGCGGA TCGTCAGCGA GGACGGTGTG CAGCTCGATA TCCGCCTCGC GCCCGCGGCC
GTGATCGAAG CCGACGAAAC GGACATGCGC CGCGTGATCG GCAATCTCGT CGAGAACGCG
CGCAAGTACG GGCAGAGCAA GCAGGACGGC ATCGCGCGCA TCCTGCTTGA AACGCGGGTC
ACGCACGCGC GCGTCGAGCT CGTCGTCGCC GACGAGGGCC CCGGCATCCC CGAGGATCAG
TTGCCGCTCG TGATGCGCCC GTTCTATCGC GTCGACACCG CGCGCAGCAA GGCCGACGGC
ACCGGCCTCG GCATGGCGAT CGTGCTGCGC CTCGTCAATC GCTACCGCGG CGCGCTGCGG
CTGCGCAACC GCACGCCCGA CGCGGGCCTC GAAGTCACGC TGGAGTTTCC GAGCGCCAAA
GCGCGTGCGG CTGCGTGA
|
|---|
| Protein sequence | MTLVFGGLFW RTFLLIALLI AVSLAAWFQS FRVIEREPRA QRVALQLVAI VKLTRTALLY
SDPDLRRALL QDLESNEGVR VYPREKTDKF KLQPDESVNR LIEHDIRSRL GDDTVIAQSV
NDIPGVWISF KIDDDDYWVA LDRDQLDTVT GLQWAGWGLF ALALSLIGSA FITSLVNQPF
SRLALAARKV GSGQTPEPLP ERGMGVATET NRSFNQMVRD LEQLEADRAL MLAGISHDLR
TPLARLRLET EMSPSDQATK DAMVDDIEQM DRIIAAFIDY ARPAQRTPEP VDLSQVAREV
AARIVSEDGV QLDIRLAPAA VIEADETDMR RVIGNLVENA RKYGQSKQDG IARILLETRV
THARVELVVA DEGPGIPEDQ LPLVMRPFYR VDTARSKADG TGLGMAIVLR LVNRYRGALR
LRNRTPDAGL EVTLEFPSAK ARAAA
|
|---|
| |