Gene BMASAVP1_A1969 details

Gene Information

• Locus tag: BMASAVP1_A1969
• Symbol: nuc
• ID: 4679939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 1949098
• End bp: 1949721
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639846233
• Product: endonuclease Nuc
• Protein accession: YP_993286
• Protein GI: 121598758
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.139279
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTTGC CGAAGCGGTT CGCCGCCGCA TGTCTCGCCG CCGCTTTCCT GTGCGGCGCC 
CCGCCCGCCG TCAGCAAGAC GACCTCCGAA TCACTGCTCG AGCGCCTCGT CGCGCTGATC 
GCCGACGCAC TGCCGTCATC CGCGAAGCAA GCGCCGGCGG GCCAGGTCGT CGAGGCCGCG 
TTCTCGCCGG ACGGCGGCGC CGAAGCACTC GTGTTGAAAG TGATCGGCAC GTCGCGCGCG 
TCGCTGCGCC TCGCCGGCTA TTCGTTCACG TCGCCGAAGG TCGTGCGCGC GCTGCTCGAC 
GCACATCGGC GCGGTGTCGA CGTCGCGATC GTCGTCGACA ACGACGGCAA TCGCTCGAAG 
GCGTCGAAAC AGGCGCTCAA TCTGCTCGTC AACGCGAAAG TACCGACGCG CACGATCGAT 
CGCTACGCGA TCCACCATGA CAAGTACATC GTCGTCGACG GCCGCCACGT GGAGACGGGG 
TCGTTCAACT ACAGCGCCGC CGCGGCCGCG CGCAATTCGG AAAACGTGCT CGTCGTCTGG 
AACAACCCTG CGCTCGCCGC GCAATACCTG AAGCACTGGC AGAACCGGTT CGATCAAGGA 
ACCGCCTATC GGTCGGCTTA TTGA 

 

Protein sequence

MQLPKRFAAA CLAAAFLCGA PPAVSKTTSE SLLERLVALI ADALPSSAKQ APAGQVVEAA 
FSPDGGAEAL VLKVIGTSRA SLRLAGYSFT SPKVVRALLD AHRRGVDVAI VVDNDGNRSK 
ASKQALNLLV NAKVPTRTID RYAIHHDKYI VVDGRHVETG SFNYSAAAAA RNSENVLVVW 
NNPALAAQYL KHWQNRFDQG TAYRSAY