| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1968 |
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| Symbol | |
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| ID | 4681377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 1947794 |
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| End bp | 1948903 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639846232 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_993285 |
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| Protein GI | 121599981 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.520667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA CCGCTTTCTT CACCGACGAA CGCACTTTCT GGCACACGGG CGGCGCGCAT
GCGCTGTTCT TTCCGGTCGG CGGCTGGGTG CAGCCGCCGT CGAGCGCGGG CTATGCGGAA
TCGCCCGATT CGAAGCGGCG TCTGCTGTCG CTCGTGCACG CGTCCGGGCT CGCGGCGAAA
CTCGACATGT CGAGCGCGCC CGCCGCGGCC GACGACGATC TGCGGCGCAT CCACCCCGCG
CACTACCTCG ACGCGTTCAA GCGCGCGAGC GACGCGGGTG GCGGCGATCT CGGCGAACTC
GCGCCGTTCG GCCGTGGCAG CTACGAGATC GCGGCGCTAT CCGCGGGGCT CGCGCTCGCC
GCCGTCGACG CGGTGCTCGC CGAGCGCACG GCCAACGCAT TCTCGCTGTC GCGCCCGCCC
GGCCATCACT GCCTGCGTGA CAAGCCGATG GGTTTTTGCC TGCTCGCGAA CATTCCGATC
GCGATCGAGG CCGCGCGCGC GAAACATCGC GTCGAGCGCG TCGCGGTGAT CGACTGGGAC
GTGCATCACG GCAACGGCAC GCAGTCGATC TACTACGACG ATCCGAACAC GCTGACGATC
TCGCTGCATC AGGACCGCTG CTTTCCGCCC GGCTACAGCG GCGCCGACGA ACGCGGCGCG
GGCGCGGGCG CGGGCGCGAA CGTCAACGTC CCGCTCCTCG CGGGCGCCGG CGACGACGCG
TATCGATACG CATTCGAGCG AATCGTGCTG CCCGCGCTCG ACGCGTTCCG GCCGGAGCTC
GTCATCGTCG CGAGCGGGCT CGACGCGAAT GCGGTCGACC CGCTCGCGCG GATGCAACTG
CACAGCGACA GCTACCGGTA CATGACGCAT GCGCTGAAGC AGGCCGCGCA GCGGCACTGC
GGGGGACGGC TCGTCATCGT GCACGAGGGC GGTTATTCGG AGGCCTACGT ACCGTTTTGC
GGGCATGCGA TCGTCGAGGC ACTGGCGGGC ATGCGCACCG ACGTCGCCGA TCCGATGCTC
GAGCTCGCGA TCGCGCAGCA GCCCGGCGAG CGTTTCAACG CATTCCAGCG GCAACTGATC
GACGAAATGG CGACGAGCTT CGGTTACTGA
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| Protein sequence | MTKTAFFTDE RTFWHTGGAH ALFFPVGGWV QPPSSAGYAE SPDSKRRLLS LVHASGLAAK
LDMSSAPAAA DDDLRRIHPA HYLDAFKRAS DAGGGDLGEL APFGRGSYEI AALSAGLALA
AVDAVLAERT ANAFSLSRPP GHHCLRDKPM GFCLLANIPI AIEAARAKHR VERVAVIDWD
VHHGNGTQSI YYDDPNTLTI SLHQDRCFPP GYSGADERGA GAGAGANVNV PLLAGAGDDA
YRYAFERIVL PALDAFRPEL VIVASGLDAN AVDPLARMQL HSDSYRYMTH ALKQAAQRHC
GGRLVIVHEG GYSEAYVPFC GHAIVEALAG MRTDVADPML ELAIAQQPGE RFNAFQRQLI
DEMATSFGY
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