| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1917 |
|---|
| Symbol | |
|---|
| ID | 4679206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1897932 |
|---|
| End bp | 1898951 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639846181 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_993236 |
|---|
| Protein GI | 121600762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTAC TGAAGAAGTG CGCCGCGCTC GCGGCGCTCG CCGTCGTATT GCTGGGCGTC
GCGTGCGCGG GCGGCGCCTA TTACTGGGCC ACTCGGCCGC TCGCGCTCGC CGCGCCGATC
CTCGATGTGA CGATCAAGCC CCGCAGCAGC GTGCGCAGCG TCGCGCAGCA ACTCGTGCAC
GGCGGCGTGG GCGTCGAGCC GCGCCTGTTC GTCGCGATGA CGCGCGTGCT GTTCCTGTCG
AGCCGGCTCA AGTCCGGCAA TTACGAATTC AAGACGGGCG TGAGCCCTTA CGAGGTGTTG
CAGAAGGTCG CGCGCGGGGA CGTGAACGAA TATGTCGTGA CCGTGATCGA GGGCTGGACG
TTCCGGCGCA TGCGCGCGGA GCTCGACGCG AATGCGGCGC TCGCGCATGC GAGCGCGGGG
ATGAGCGACG CGGCGCTGCT GCGCGCGATC GGCGCGCCCG CCGAAGTCGT CGCGCGCGGC
ACCGGCGAGG GGCTGTTCTT TCCGGATACC TATCTGTTCG ACAAGGGCAC GAGCGACCTG
AACGTGTATC GGCGCGCGTA CCGGCTGATG CAGGCGCGCC TGGCCGACGC GTGGACCGCC
CGTCGGCCCG GCCTGCCGTT CAAGACCCCT TACGAGGCGC TGACGGTCGC GTCGCTCGTC
GAGAAGGAGA CGGGGCACGC GTCCGACCGT GCGTTCGTGT CGGGCGTGTT CGCGAATCGC
CTGCGGGCCG GGATGCCGCT GCAGACCGAT CCCTCGGTGA TCTACGGAAT GGGCGACGCG
TACACGGGGC GGCTGCGCAA GCGCGATCTG CAGACCGACA CTCCGTACAA TACCTACACG
CGCCGCGGGC TGCCCCCGAC GCCGATCGCG CTGCCGGGCG AGGCGGCGCT CTACGCCGCG
GTGAACCCGG CGGCGACGTC CGCGCTCTAT TTCGTCGCGA GGGGCGACGG CACGAGCGTC
TTCTCGGACA CGCTCGGGGA TCACAACAAG GCCGTGGACA AATACATACG AGGTCAATGA
|
|---|
| Protein sequence | MSLLKKCAAL AALAVVLLGV ACAGGAYYWA TRPLALAAPI LDVTIKPRSS VRSVAQQLVH
GGVGVEPRLF VAMTRVLFLS SRLKSGNYEF KTGVSPYEVL QKVARGDVNE YVVTVIEGWT
FRRMRAELDA NAALAHASAG MSDAALLRAI GAPAEVVARG TGEGLFFPDT YLFDKGTSDL
NVYRRAYRLM QARLADAWTA RRPGLPFKTP YEALTVASLV EKETGHASDR AFVSGVFANR
LRAGMPLQTD PSVIYGMGDA YTGRLRKRDL QTDTPYNTYT RRGLPPTPIA LPGEAALYAA
VNPAATSALY FVARGDGTSV FSDTLGDHNK AVDKYIRGQ
|
|---|
| |