| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1897 |
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| Symbol | |
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| ID | 4679184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 1881735 |
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| End bp | 1882442 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639846161 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_993216 |
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| Protein GI | 121599250 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.225153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTCAAT TCGGCCGGGC GGTCGACGAA CATGGCGCGG ACGCCGCGCA CGGCAGCGAT
CGGACGGCCG GCGCGGCCGC CGACGCGGCG GCGCGCGGCG AGCGTTTTCG CGCGCTCGCG
CTGCCGCATC TGGACGCCGC ATACAACCTC GCGCGCTGGC TGTGCGGCAA TTCGAGCGAC
GCGGACGACG TCGTGCAGGA GGCGTGCATG CGCGCGTTGC GCTTTCTCGA TTCGTGCCGC
GGCGACAACG CGCGGCCGTG GCTGCTGACG ATCGTGCGCC ATACCTGGTA CAGCGAATGG
CGGCGGCGGG CGAACGCGCA CGAAGTGGCC GCCGACGCGC TCGACGCGGC CGATTCGACG
GACGATTGGC ATCCGGCGGT GGAGGACCCG CTCGCGCTTC TTTTGCGCAG TGAAGACGCG
CATCGCGTGA ACGCCGCGCT CGCGAAGCTG CCGCCCGAAT ATCGGGAGGT GCTCGTTTTG
CGCGAAATGG AGGACATGAG TTACCGCGAG ATTGCGGCAA TCGCGGACCT GCCGGTCGGG
ACGGTGATGT CGCGGCTCGC ACGGGCGCGG CGGCGGTTCG CGGCGACGCT CGGCGGCGCG
CCCGCGTCGC GGTCGGCCGC GCAGGTGCAC CCGGGCGAGC GCGCGGCGCA GCGCGAACGC
GGCGCGCCGG CATCCGGAAC CGCATCGGAG GCCATCGATG GACTGTAA
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| Protein sequence | MGQFGRAVDE HGADAAHGSD RTAGAAADAA ARGERFRALA LPHLDAAYNL ARWLCGNSSD
ADDVVQEACM RALRFLDSCR GDNARPWLLT IVRHTWYSEW RRRANAHEVA ADALDAADST
DDWHPAVEDP LALLLRSEDA HRVNAALAKL PPEYREVLVL REMEDMSYRE IAAIADLPVG
TVMSRLARAR RRFAATLGGA PASRSAAQVH PGERAAQRER GAPASGTASE AIDGL
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