Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1887 |
Symbol | |
ID | 4681144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1874246 |
End bp | 1875469 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639846151 |
Product | NLP/P60 family lipoprotein |
Protein accession | YP_993206 |
Protein GI | 121598341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.850579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGTC TTTCGCTGTC CGTTCTCGTG ATTTCGCTGC TCGCGGCCTG CTCGAGCGTG CCGCCCAAGT CGGCGCGCTC GTCGTCCGGC ATGGCGATTA CCACGCCGCG CGCGTACGCG CCGCCGCGCG GCTTTCCGAA TTTCGTCGAC CATAGCGTCG GCCGCGAGGA AATCTCGATC CAGGCGATGA GCCTCGTCGG CGTGCCGTAC CGTTGGGGCG GCAACACGCC CGACAGCGGC TTCGACTGCA GCGGGCTCGT GCGCTATGTC GTCGATCGCG CGGCGAGCGT GAATCTGCCC CGCACGACCG CCGACATGAG CTCGATCGGC GAATCGATCG AGCCCGACGG CATCGCGCCG GGCGATCTGA TCTTCTTCAA TACGTCGGGG CGGCCGCATT CGCACGTCGG CATCTATGTC GGCAAGCTGC GCTTCGTGAA CGCGCCGTCG ACGGGCGGCA CCGTGCGGCT CGACTATCTG ACGAATCCGT ATTGGGCGAA GCGCTTCGAC GGCATCCGGC GCGTCGCGGC GCCGAAGGCG AAGCCGGCGC CGTTCGATGC GCCGACCTAT CAGGCGAGCC GGCCGTCGGA ACCCGCGCCG CGCGTGAGCC CGGCAGCCGC GGCGCCGGCC TATGCGGCAG TCAATGCGCC GGCGGCGTCC GCCGCACGCG CGGCAGCGCC CTCCGCGCCC GGCTATGCGG CGAACTCGGC GACGCCGGCC GCGGCACGCG CCGCAGCACC GCCGCCATCG TCCGAATATG CCGCCCACTC CGCCGCTGCG ATGGCCTCAG CCCCGGCCTC GGCCGCGCCG CTGCCCAACG CCGTGCCGGC TGCGGCAACC GCCGCAACCG CCGCAACCGC CGCCGATCCG TACGAGCCGC CGCCGTCCGC GATGTCCGCC GCGCGCCGGC AAGCGCAGGC TGCCGGCGCG AGTTCGCCCG TGCTCGCGGC CGGCAACCCG GGCGGCGCGG TGCCGCCGGC CGCGCCGCCC GCCGGCGGTC CGACGAGCAT GGCCGGCGCA TCGGCGGCCG ATCCGATCGA CGCCGCCGCG GACGCGTTCG AGCCGCCGCC GCCCACCGCG CGCGCGGCCG CCCGTCAGGC GCAACTCGCC GCGCCCGGCA ACGTGCAGGT CCTGCGCGCG TCGACAGCCG GCAGCGCCGC AAGCGCCGCC GCAACCGGCT CGAACGACGA CCCGATCGCC CGCTTCGCGA ACGGCGGTTA TTGA
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Protein sequence | MLRLSLSVLV ISLLAACSSV PPKSARSSSG MAITTPRAYA PPRGFPNFVD HSVGREEISI QAMSLVGVPY RWGGNTPDSG FDCSGLVRYV VDRAASVNLP RTTADMSSIG ESIEPDGIAP GDLIFFNTSG RPHSHVGIYV GKLRFVNAPS TGGTVRLDYL TNPYWAKRFD GIRRVAAPKA KPAPFDAPTY QASRPSEPAP RVSPAAAAPA YAAVNAPAAS AARAAAPSAP GYAANSATPA AARAAAPPPS SEYAAHSAAA MASAPASAAP LPNAVPAAAT AATAATAADP YEPPPSAMSA ARRQAQAAGA SSPVLAAGNP GGAVPPAAPP AGGPTSMAGA SAADPIDAAA DAFEPPPPTA RAAARQAQLA APGNVQVLRA STAGSAASAA ATGSNDDPIA RFANGGY
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