Gene BMASAVP1_A1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1887 
Symbol 
ID4681144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1874246 
End bp1875469 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content74% 
IMG OID639846151 
ProductNLP/P60 family lipoprotein 
Protein accessionYP_993206 
Protein GI121598341 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.850579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTC TTTCGCTGTC CGTTCTCGTG ATTTCGCTGC TCGCGGCCTG CTCGAGCGTG 
CCGCCCAAGT CGGCGCGCTC GTCGTCCGGC ATGGCGATTA CCACGCCGCG CGCGTACGCG
CCGCCGCGCG GCTTTCCGAA TTTCGTCGAC CATAGCGTCG GCCGCGAGGA AATCTCGATC
CAGGCGATGA GCCTCGTCGG CGTGCCGTAC CGTTGGGGCG GCAACACGCC CGACAGCGGC
TTCGACTGCA GCGGGCTCGT GCGCTATGTC GTCGATCGCG CGGCGAGCGT GAATCTGCCC
CGCACGACCG CCGACATGAG CTCGATCGGC GAATCGATCG AGCCCGACGG CATCGCGCCG
GGCGATCTGA TCTTCTTCAA TACGTCGGGG CGGCCGCATT CGCACGTCGG CATCTATGTC
GGCAAGCTGC GCTTCGTGAA CGCGCCGTCG ACGGGCGGCA CCGTGCGGCT CGACTATCTG
ACGAATCCGT ATTGGGCGAA GCGCTTCGAC GGCATCCGGC GCGTCGCGGC GCCGAAGGCG
AAGCCGGCGC CGTTCGATGC GCCGACCTAT CAGGCGAGCC GGCCGTCGGA ACCCGCGCCG
CGCGTGAGCC CGGCAGCCGC GGCGCCGGCC TATGCGGCAG TCAATGCGCC GGCGGCGTCC
GCCGCACGCG CGGCAGCGCC CTCCGCGCCC GGCTATGCGG CGAACTCGGC GACGCCGGCC
GCGGCACGCG CCGCAGCACC GCCGCCATCG TCCGAATATG CCGCCCACTC CGCCGCTGCG
ATGGCCTCAG CCCCGGCCTC GGCCGCGCCG CTGCCCAACG CCGTGCCGGC TGCGGCAACC
GCCGCAACCG CCGCAACCGC CGCCGATCCG TACGAGCCGC CGCCGTCCGC GATGTCCGCC
GCGCGCCGGC AAGCGCAGGC TGCCGGCGCG AGTTCGCCCG TGCTCGCGGC CGGCAACCCG
GGCGGCGCGG TGCCGCCGGC CGCGCCGCCC GCCGGCGGTC CGACGAGCAT GGCCGGCGCA
TCGGCGGCCG ATCCGATCGA CGCCGCCGCG GACGCGTTCG AGCCGCCGCC GCCCACCGCG
CGCGCGGCCG CCCGTCAGGC GCAACTCGCC GCGCCCGGCA ACGTGCAGGT CCTGCGCGCG
TCGACAGCCG GCAGCGCCGC AAGCGCCGCC GCAACCGGCT CGAACGACGA CCCGATCGCC
CGCTTCGCGA ACGGCGGTTA TTGA
 
Protein sequence
MLRLSLSVLV ISLLAACSSV PPKSARSSSG MAITTPRAYA PPRGFPNFVD HSVGREEISI 
QAMSLVGVPY RWGGNTPDSG FDCSGLVRYV VDRAASVNLP RTTADMSSIG ESIEPDGIAP
GDLIFFNTSG RPHSHVGIYV GKLRFVNAPS TGGTVRLDYL TNPYWAKRFD GIRRVAAPKA
KPAPFDAPTY QASRPSEPAP RVSPAAAAPA YAAVNAPAAS AARAAAPSAP GYAANSATPA
AARAAAPPPS SEYAAHSAAA MASAPASAAP LPNAVPAAAT AATAATAADP YEPPPSAMSA
ARRQAQAAGA SSPVLAAGNP GGAVPPAAPP AGGPTSMAGA SAADPIDAAA DAFEPPPPTA
RAAARQAQLA APGNVQVLRA STAGSAASAA ATGSNDDPIA RFANGGY