Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1835 |
Symbol | ispG |
ID | 4680357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1822439 |
End bp | 1823689 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639846099 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_993154 |
Protein GI | 121599255 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.28008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGGCG GGCATGCGCC GCGGCGCGTG TCGCATGCGG TCGATGTCCG CTGGGGCGGC ACGCTCGTGA CGATCGGCGG CGCGGCGCCC GTGCGCGTGC AGTCGATGAC GAACACCGAT ACGGCCGACG CGATCGGCAC CGCGATCCAG GTGAAGGAGC TCGCGAACGC GGGCTCCGAG CTCGTGCGCA TCACCGTGAA CACGCCGGAG GCGGCCGCTG CCGTGCCGGC GATTCGCGAG CAGCTCGACC GGATGGGCGT GACGGTGCCG CTTGTCGGCG ATTTCCACTA CAACGGCCAC CTGCTGCTGC GCGACTACCC GGACTGCGCG CAGGCGCTGT CGAAATACCG GATCAACCCG GGCAACGTCG GCCAGGGCGC GAAGCGCGAT TCGCAGTTCG CGCAGATGAT CGAAGCCGCG ATCAAGTACG ACAAGCCGGT GCGGATCGGC GTGAACTGGG GCAGCCTCGA TCAGGACCTG CTCGCGCGGA TGATGGACGA GAACGGCGCG CGCGCCGAGC CGTGGGAGGC GCAGAGCGTG ATGTACGAGG CGCTGATCCA GTCGGCGATC GGCTCGGCCG AGCGCGCGGT CGAGCTCGGC CTCGGCCGCG ACAAGATCGT GCTGTCGTGC AAGGTGAGCG GCGTGCAGGA CCTGGTCGCC GTGTACCGCG AACTGTCACG CCGCTGCGGC TTCGCGCTGC ACCTCGGCCT CACCGAGGCG GGCATGGGCT CGAAGGGCAT CGTCGCGTCG ACCGCGGCGA TCGGTCTGCT GCTGCAGGAA GGCATCGGCG ACACGATCCG CATCTCGCTC ACGCCGGAGC CGGGCGCGCC GCGCACGGGC GAAGTGGTGG TCGGCCAGGA GATCCTGCAG ACGATGGGGC TGCGCTCGTT CGCGCCGATG GTCGTCGCGT GTCCGGGCTG CGGCCGCACG ACGAGCACGC TGTTCCAGGA GCTCGCGCTG CGGATCCAGA CCTACCTGCG CGAACAGATG CCCGTGTGGC GCAGCGAATA CCCGGGCGTC GAGAAGATGA ACGTCGCGGT GATGGGGTGC ATCGTCAACG GCCCGGGCGA GTCGAAGCAC GCGAACATCG GCATCAGCCT GCCGGGCTCG GGCGAGAATC CGGCCGCGCC GGTGTTCGTC GACGGCGAGA AAGTGAAGAC GCTGCGCGGC GAGCACATCG CGGAAGAGTT CCAGCAGATC GTGAGCGACT ACGTCGCGCG CACCTACGGC CGCGCCGCGG CGCAGAATTA A
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Protein sequence | MFGGHAPRRV SHAVDVRWGG TLVTIGGAAP VRVQSMTNTD TADAIGTAIQ VKELANAGSE LVRITVNTPE AAAAVPAIRE QLDRMGVTVP LVGDFHYNGH LLLRDYPDCA QALSKYRINP GNVGQGAKRD SQFAQMIEAA IKYDKPVRIG VNWGSLDQDL LARMMDENGA RAEPWEAQSV MYEALIQSAI GSAERAVELG LGRDKIVLSC KVSGVQDLVA VYRELSRRCG FALHLGLTEA GMGSKGIVAS TAAIGLLLQE GIGDTIRISL TPEPGAPRTG EVVVGQEILQ TMGLRSFAPM VVACPGCGRT TSTLFQELAL RIQTYLREQM PVWRSEYPGV EKMNVAVMGC IVNGPGESKH ANIGISLPGS GENPAAPVFV DGEKVKTLRG EHIAEEFQQI VSDYVARTYG RAAAQN
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