| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1832 |
|---|
| Symbol | |
|---|
| ID | 4679511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1819208 |
|---|
| End bp | 1820353 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639846096 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_993151 |
|---|
| Protein GI | 121600077 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.999368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGC TGAAACGTTA CGCTGCACCC GTTGCCTGCG CGGCGGCCGT CCTGGTTTTC
GCGGCCTGTT CGTCAACGAA GGACGCGCGC CGCGTGCCGA CGCCGCTCAC CGAGTTCAAA
CCCGTGCTCG ACGTGCAGCA GGTGTGGACG GCGAGCGTCG GCAAGGGCGG CCGCTACTCG
TTCTCGCCCG TCGCGGTGGG CGACGCCGTG TATGTCGCCG GCGCGAACGG TTCGGTCGAG
AAGATCGACG CGAAGACGGG CCAGCAAGTC TGGCGTACGA AGATCGGCTC GGACTTGTCG
GCGGGCGTCG GCAGCGACGG CAACCTGACC GCGGTCGGCG CGCTGAAGGG CGGCGTGTTC
GTGCTCGGCC CGGACGGCAA GCAGTTGTGG AAAGCCACCG TGCAAGGCGA GATCTTCTCG
CCGCCGCTCG TCGGCAACGG TCTCGTGATC GTGCGCACGA TCGACGGCCA GGTGATCGCG
TTCGCCGCGC AGACGGGCGA GCAGAAGTGG ACTTACCGCA ACCGCGCGGT GCCGCTGAAC
CTGCGCGTGT CGGCCGGCAT GACGTTCGCG GGCGACGCCG CGGTGCTCGC GGGCTTCCCG
GGCGGCGGCC TCGTCGCGCT GAACCTGCAG ACGGGCGAGC CGTTCTGGCA GACGCCCGTG
TCGTTTCCGA AAGGCGTGAC CGAAGTCGAG CGGATCAACG ACGTGACGGG CGCGCCGACG
CTCGTCGGCG CCGAGACGTG CGCGGTGACG TTCCAGGGGC AGCTCGGCTG CTTCGATGCG
AACTCGGGCC GCCCGTTGTG GGAAAAGCCG TTTTCGAGCC GCAGCGGCGT CGCGCAGGAC
GATACGGTCG TCGTGGGCGG CGACGACTGG TCGGTCGTGT CGGCTTACGA CGTCGCGACG
GGCAAGGCGC TCTGGCGCAA CGACAAGCTG AAGAGCCGCG ACGTCGGCGT GCCGTACCTG
CTCGGCCGCG CGGTCGTGCT CGGCGACTAC AAGGGCTTCG TGCATTTCCT GTCGCGCGAT
GACGGCACGT TCGTCGCCCG GATGAAGACG GACGGCAGCG CGATCGCCGC CGCGCCCGTG
CTTGCCGGCA ACACGCTCGT CGTCCTGACG CAGGACGGCG GCGTATACGG TTTCCGTCCG
CGCTAA
|
|---|
| Protein sequence | MNLLKRYAAP VACAAAVLVF AACSSTKDAR RVPTPLTEFK PVLDVQQVWT ASVGKGGRYS
FSPVAVGDAV YVAGANGSVE KIDAKTGQQV WRTKIGSDLS AGVGSDGNLT AVGALKGGVF
VLGPDGKQLW KATVQGEIFS PPLVGNGLVI VRTIDGQVIA FAAQTGEQKW TYRNRAVPLN
LRVSAGMTFA GDAAVLAGFP GGGLVALNLQ TGEPFWQTPV SFPKGVTEVE RINDVTGAPT
LVGAETCAVT FQGQLGCFDA NSGRPLWEKP FSSRSGVAQD DTVVVGGDDW SVVSAYDVAT
GKALWRNDKL KSRDVGVPYL LGRAVVLGDY KGFVHFLSRD DGTFVARMKT DGSAIAAAPV
LAGNTLVVLT QDGGVYGFRP R
|
|---|
| |