Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1829 |
Symbol | hfq |
ID | 4681567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1817222 |
End bp | 1817461 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639846093 |
Product | RNA-binding protein Hfq |
Protein accession | YP_993148 |
Protein GI | 121599379 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAC GTGCCGGTTT CGATCTATCT CGTGAACGGC ATCAAGCTCC AAGGGAACAT CGAATCGTTC GACCAGTACG TCGTGTTGCT CCGGAACACG GTTACCCAGA TGGTTTACAA GCACGCCATT TCGACGGTCG TGCCGGCGCG TCCGGTGAAC TTCCACCCGG ATGCGGAAGC AGCGTCCTAA
|
Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDAEAAS
|
| |