Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1774 |
Symbol | |
ID | 4678595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1757069 |
End bp | 1758079 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639846039 |
Product | type II secretion system protein |
Protein accession | YP_993094 |
Protein GI | 121599511 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.162167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCCA GCCGCCTCGG CGCAATCGCG CTCGTTCTCG GCGCAATCGG CGTGCTGATG CTCGCCGCGC TCGCGATCAT GCAGGCCGTG CTCGCGCGGC GCACCGGCCG CACGCTCGCG GACGCGCTCG ATCAGCGCGC CGCCGCGTTG GAGGCGGCCG CCGCGCGGGT CGCGGCGGGG GCGGCCGGCG CGGCGCGCGC GGGCATGCCC GAGGCGGCGC CTGACGCGCG CCGTCCGCGC TTCGCGGCGC TGCTCGATCG CGCGGGCCGG TTCGGAATGC GGCTGCTCGA TACGCGGCTC GGCAAGCAGA TCGTCGCCGA CGAAGACCGG ATGCTGCTCG AACAGTGCGG CTACGTCGAC GCGCACACGC GCGGCATCTT CCTGAGCGCG CGGATCGCGT GTGCGATCGC GCTGCCCGCC GCCGTCGCGC TCGTCGGCGG CGAGCCGGTC CGCACGCATC TGGGCGCGTG GGTCGCGCTG TCGGTGATCG CCGGCTTCAT GCTGCCGAAG ACCTACGTGC GCCGCCGCGC GGCGGCGCGC CGCCAGTCCG TCGTCGACGA GATGCCGCTG CTCGTCGACA TGCTGCGGCT CTTGCAGGGC GTCGGGCTGT CGCTCGACCA GAGCATCCAG GTCGTCACCA ACGACTTCAG GGGGATGCTG CCCGTGCTGT CGTCGGAGCT CGGGATCGCG CAGCGGCAGT TCGTCGCGGG GCGCACGCGC GAGCAGTCGC TGCAGCGTCT CGCGACGAGC TTCGACAACG AGGACCTGCG CGCGATCGTG CGCCTGCTGA TCCAGGTCGA CAAGCACGGC GGCGCGGTGC AGGAGCCGCT CAAGCAGTTC GGCGACCGGC TGCGCGAAGT GCGCCGCGCG ATGCTGCGCG AGCGCATCGG CCGCCTCACG GTGAAAATGA CGGGCGTGAT GATTCTCACG CTGCTGCCCG CGCTGTTCAT CGTGACGGCG GGGCCGGGGA TGCTCGCCGT CACGCATGCG CTCACGGCCG CGCGCCGCTA G
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Protein sequence | MDPSRLGAIA LVLGAIGVLM LAALAIMQAV LARRTGRTLA DALDQRAAAL EAAAARVAAG AAGAARAGMP EAAPDARRPR FAALLDRAGR FGMRLLDTRL GKQIVADEDR MLLEQCGYVD AHTRGIFLSA RIACAIALPA AVALVGGEPV RTHLGAWVAL SVIAGFMLPK TYVRRRAAAR RQSVVDEMPL LVDMLRLLQG VGLSLDQSIQ VVTNDFRGML PVLSSELGIA QRQFVAGRTR EQSLQRLATS FDNEDLRAIV RLLIQVDKHG GAVQEPLKQF GDRLREVRRA MLRERIGRLT VKMTGVMILT LLPALFIVTA GPGMLAVTHA LTAARR
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