| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1757 |
|---|
| Symbol | |
|---|
| ID | 4681236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1739342 |
|---|
| End bp | 1740928 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639846022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_993077 |
|---|
| Protein GI | 121599515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.308212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGT TCAAATCATC GCTGCGTCGC GGGTTGCGCG TTTCGGGATG CGCGCTATGG
TTGGCGCTGT CGAAGCTCGA CGCCGCACAT GCGGCTGCCG GACCCGACGC ATCGCCGGAC
GCATGGCCGA GCGCCGCGCT GTCCGATCGC GCCGCCGTCG AGGTGGACGC ATCGCAATTG
CTGCCGACGC CCCAGCTCGT GCGGTGGCAA GTCGACCTCG ACCGCCGCGG CCTGCGATCG
ACCGGTTCGC CCGCGCACGA GCGCTACATC GACGTGCTGC GCCGCCGCCT CGCGCGCGCC
GGCGTGCAGC AGCTCCATAC CGAGGCGACG ACGCTCGCGC ACTGGGCCGT GCGGCACTGG
CGGCTCGACG TCGCCGACGG CGCGCCGCGC GAGCGCATCG ACGTCGCGGG CTACCTTCCG
TATTCCGGCG ACACCGGCCG CGACGGCATC GTCGCGCCGA TCCGCTATCT CGCGGCCGGG
CAGACGCCCG ATGCGGACGT GGCCGGCAAG ATCGCCGTCG TCGAATGGCC GGCATTGCCG
TTGACGGGCG CGTTCTTCCG CGAGCGCGCG CTGCGCGTGT TCGATCCGGA CAACGCGTTC
GCGCCGTCGG CGCCCTATGT CCGCACGAGC TTCATGCTCG GCACGCTCAC CGCGATGCTC
GACAGGCTGC AAGCGGCGGG CGCGGCGGGC GTCGTGATGA TCGCCGATAC GTCGAGCGCC
GAGGCGACCC GCCTGTACGC GCCGTACGAC GGCCGGCTGC GGCGCGTGCC CGGCCTGTTC
GTCGATCGCG CGACGGGCGC GAAGCTCGCT TCGCTCGCGG AGCGCCGCGC GACGCTGCGG
CTGTCGCTCG ATGCCGGCGT CGAGCGCGTG CACACCCGCA ACCTGATCGG CATCATCCCC
GGCATGAGCG ATGAGCTGAC CGTCGTCAAC AGCCACACCG ACGGCACGAA CGGGATCGAG
GACAACGGCC CGAACGCGAT CGTCGCGATC GCGCAATACC TGAGCCGCCT GCCCCGCGCG
GCGCTGCCTC GCACGGTGAT GATCCTGCTG TCGAGCGGGC ATTTCGCGGG AGGCGTCGGC
GCCGAGGATT TCATCGCGCG ACATGCGCGC GACGGCCTCG TCGCGCGCAT CGCGTGCGTC
GTGACGATCG AGCACCTCGG CGCGCAGGAA TGGCTGCCGA GCGAGCAAGG CGCGCTCGCG
CCGACGGGCC GCGCGGAGCC CACCGCGCTG TTCATGCCGG CCGTGCCGGC GCTCGTCGAC
GCGGCCGACG CGCTCGTGCG CCGCGCGAAC GCCGCGCCCG CGTTCGTGAT GCCGCCGCTG
AATCCGAACG GAGACGGCAG CGCGAACGAC GCGCTCTGGC CCGGCGAAGG ACAGTACTTC
TGGGGCCGCG CGCGCGTGCC GACGATCAAC CTGATCACGG GGCCCACGTA TCTCCTCAAC
TACGGCGTAT CGACGGCGGA GAAGATCGAC TATGCGCGCC TGCGCCGCGA GATCGCCGCG
ACGACGCAGA CGCTGCTCGA TCTATCGCGG GTGCCGTTCG ACGCGCTGCG CGCGGTTCCA
CCGCGAACGC GCGCGGCGGC GCCGTGA
|
|---|
| Protein sequence | MASFKSSLRR GLRVSGCALW LALSKLDAAH AAAGPDASPD AWPSAALSDR AAVEVDASQL
LPTPQLVRWQ VDLDRRGLRS TGSPAHERYI DVLRRRLARA GVQQLHTEAT TLAHWAVRHW
RLDVADGAPR ERIDVAGYLP YSGDTGRDGI VAPIRYLAAG QTPDADVAGK IAVVEWPALP
LTGAFFRERA LRVFDPDNAF APSAPYVRTS FMLGTLTAML DRLQAAGAAG VVMIADTSSA
EATRLYAPYD GRLRRVPGLF VDRATGAKLA SLAERRATLR LSLDAGVERV HTRNLIGIIP
GMSDELTVVN SHTDGTNGIE DNGPNAIVAI AQYLSRLPRA ALPRTVMILL SSGHFAGGVG
AEDFIARHAR DGLVARIACV VTIEHLGAQE WLPSEQGALA PTGRAEPTAL FMPAVPALVD
AADALVRRAN AAPAFVMPPL NPNGDGSAND ALWPGEGQYF WGRARVPTIN LITGPTYLLN
YGVSTAEKID YARLRREIAA TTQTLLDLSR VPFDALRAVP PRTRAAAP
|
|---|
| |