Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1678 |
Symbol | |
ID | 4681066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1669490 |
End bp | 1670725 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639845945 |
Product | putative CpaE protein |
Protein accession | YP_993004 |
Protein GI | 121600845 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.486852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGCAT TCGACCGGGT GGGCGGCGCG CGGCCCGTGA AGGAACTGCG CGACGCGGCG GGCGGCGCGC GCCTCGTCGC GATCGTCGCC GACGCGGCGA GCGACGAGGT GATCCGCAAC CTGATCGCCG ATCAGGCGAT GACGGGCGCG CAGGTCGCGC GCGGCGGAAT CGACGACGCG ATCGCGCTGA TGCGCGATCT TTCGCACGGG CCGCAGCATC TGCTCGTCGA CGTGTCGGGC GCGGCGATGC CGTTGTCCGA TCTCGCGCGG CTCGCCGACG TCTGCGATCC ATCGGTGAAC GTGATCGTGA TCGGCGAGCG CAACGATGTC GGGCTGTTTC GCAGCATGCT GCGCATCGGC GTGCGCGATT ATCTCGTCAA GCCGCTGACC GTCGAGCTCG TGCATCGCGC GCTGTCGGCG GCCGATCCGA ACGCCGCCGC GCGCGCGGGC AAGGCGATCG GCTTCGTCGG CGCGCGCGGC GGCGTCGGCG TGACGAGCAT CGCGGTCGCG CTCGCGCGCC ATCTCGCGGA CCGCACGCGC CGCCGCGTCG CGTACGTCGA TTTCGACTGC CACGGCGGCG CGGCGTGCTC GATGCTCGGC GTCGTCAGCA ACCAGGGGCT CGTCGAGCTG CTGCAGAATC CGCAGCGGCT CGACGCGCAA CTGATCCATC AGGCGATGGT CGCGCAGAGC GACCGGCTCT TCGTGCTGTC GGCCGAGCTG CCTTACGACA GCGAGGCGCC GTGGCGCGCG GGCGCGGTCG CGGGGCTCGT CGGCGCGCTC AGGCATCAGT TCCATTACGT GCTGCTCGAT CTGCCCGAGC GCGCGGGCCG GCTCGTCGAC GAGGCGCTCG CCGCGTGCGC GAGCGTGTAC GTGGTCGCCG ACCGCTCGGT GCACGCGGCG CGCGAGGCGG CGCGGCTGCT GCATCACGCG CAGGCGCGCG ACGGCGACGC GCACGTCTCG CTGATCCTCA ACAACGCGCA GCAGCCGGTG CGCGGGCGCG TCGAGCCGGC CGATTTCGCG CGGGCGGTGG GGCGCGCGTC GATGCTCGAG CTGCCGTACG AGCCGCAAAC GCTCGCCGTC GCCGAGAATC TCGGCGCGGC GCTCGACGCG CCGCGCGGCG ACGGCTTCGC GGCCGGCATC GGCGCGCTCG CGCAGGGGCT CACGGGCGCC GACGCGGCGC CCGCCGCGCG CCGGCCGTGG TACGCGCGGC TCGCCGGCGC GCGGGGGGCG CGGTGA
|
Protein sequence | MGAFDRVGGA RPVKELRDAA GGARLVAIVA DAASDEVIRN LIADQAMTGA QVARGGIDDA IALMRDLSHG PQHLLVDVSG AAMPLSDLAR LADVCDPSVN VIVIGERNDV GLFRSMLRIG VRDYLVKPLT VELVHRALSA ADPNAAARAG KAIGFVGARG GVGVTSIAVA LARHLADRTR RRVAYVDFDC HGGAACSMLG VVSNQGLVEL LQNPQRLDAQ LIHQAMVAQS DRLFVLSAEL PYDSEAPWRA GAVAGLVGAL RHQFHYVLLD LPERAGRLVD EALAACASVY VVADRSVHAA REAARLLHHA QARDGDAHVS LILNNAQQPV RGRVEPADFA RAVGRASMLE LPYEPQTLAV AENLGAALDA PRGDGFAAGI GALAQGLTGA DAAPAARRPW YARLAGARGA R
|
| |