Gene BMASAVP1_A1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1667 
Symbol 
ID4678952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand- 
Start bp1661226 
End bp1662188 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID639845934 
Productbinding-protein-dependent transport system inner membrane component 
Protein accessionYP_992993 
Protein GI121600257 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.492454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGCATC GCATGCGATG CCGTGCGGGA CGCTCGCGCG AAACGCGGCG CGCGCATCGG 
CGCGGGCGGC ATGCGCTTCG CATATACACG CGCCGCGGGC ACGGCGCGAA GGGGCGGGCG 
GCACGCGCGC GAACGACGCG ATACGCGGCG CGCAATCACG CGACAAGCAA TCACGCGACA 
AGCAATCACG CGACAAGCAA TCTGCGGCCG CCCGCGCGGG CGGCCCGAAG CAATGAGATG 
GACGCCTGGC TCGCTCCCAA ATATCTGATG TGGTTATGGC AGGGCTTCCT GCTGACGCTC 
GGCCTGTCGC TCGCGGCGGC CGTCACGGCG ACGCTCGCGG GCTTCGCGCT CGCGATCGCC 
CGGCACGCGA AGCGCGCATC GCCGCGGCGC GCGGCGGCCG CGTACGTCGT CGCGTTTCGC 
AACACGCCGC TCGTCGTGCA GTTGCTGTTC TGGTATTTCG GCGTCGCCGC GCTGCTGCCC 
GAGCCGGCGA TGGCGTGGCT CAACGCGCCT CATGCGCTCG ACGTCGGCGG CCTCGCGCTG 
CGCTGGCCGT CGTTCGAGTT CGTCGCGGGC TGGCTCGGCC TGAGCGGCTA CACGAGCGCG 
TTCGTCGCCG AGGAGTTTCA GGCGGGGCTG CGCGGCGTGC CGGCCGGCCA GCATCACGCG 
GCGAGCGCGC TCGGCCTGTC GCCGCTGCAG GCGTTTCGCT TCGTCGTGCT GCCGCAGGCG 
GTGCGCATCG CGCTGCCGCC GCTCTTCGGC CAGTACATGA ACCTGATCAA GAACTCGTCG 
CTGACGATGG CGATCGGCGT CGCCGAGCTG TCGTACGCAT CGCGCCAGGT CGAGACCGAG 
ACGTTCAGGA CCTTCGCCGC ATTCGGCGTG TCGACCGTGC TGTACGTCGC GGCGGTCGCG 
CTGGTCGAGG CGGCCGCGCA ATGGACGCTG CGGCGGCGCG ATCGCACGTT CGCGGGGCGC 
TGA
 
Protein sequence
MPHRMRCRAG RSRETRRAHR RGRHALRIYT RRGHGAKGRA ARARTTRYAA RNHATSNHAT 
SNHATSNLRP PARAARSNEM DAWLAPKYLM WLWQGFLLTL GLSLAAAVTA TLAGFALAIA 
RHAKRASPRR AAAAYVVAFR NTPLVVQLLF WYFGVAALLP EPAMAWLNAP HALDVGGLAL 
RWPSFEFVAG WLGLSGYTSA FVAEEFQAGL RGVPAGQHHA ASALGLSPLQ AFRFVVLPQA 
VRIALPPLFG QYMNLIKNSS LTMAIGVAEL SYASRQVETE TFRTFAAFGV STVLYVAAVA 
LVEAAAQWTL RRRDRTFAGR