| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1666 |
|---|
| Symbol | |
|---|
| ID | 4680760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1660480 |
|---|
| End bp | 1661223 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639845933 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_992992 |
|---|
| Protein GI | 121598906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.21705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT CGATACTCGC GAACAATCTG CCGTACCTGC TCGTCGGCGC GTTTCCGGAC
GGCTCGCTCG GCGGCGCCGC GCTGTCGCTC GTGCTCGCGC TCGCATCGGC GCTGGCGTCG
GCCGGGCTGG GCGTCGCGCT CGGCGTCGCG CTCGCGCTCG CGACGGGGGC GCTGCGCGGC
GCGCTCGTCG TCGTGATCGG TTTTTTTCGT GCGATTCCGG TGCTGATGCT GATCTTCTGG
ACGTACTTCC TGCTGCCGGT GCTGCTGCAC GCGGACGTGC CGGGGCTCGC GGCCGTCGTG
TGCGCGCTGT CGCTCGTCGG CGGCGCGTAT CTCGCGCATT CGGTGCACGC GGGCATCCGG
GCCGCGGGCG ACGGGCAATG GCAGGCCGGG CTGGCGCTCG GGCTCACGCG CTGGCAGACG
GTGCGCCACG TGCTGCTGCC GCAGGCGGTC AGGATCATGA CGCCGTCGTT CGTCAATCAG
TGGGTGTCGC TCGTGAAGGA TACGTCGCTC GCGTACATCG TCGGCGTGCC GGAGCTGTCG
TTCGTCGCGA CCCAGGTCAA CAATCGGCTG ATGGTGTATC CCGCGCAGAT CTTCCTGTTC
GTCGGCGTGA TCTACCTGAT TCTCTGCACC GCGCTCGACG TCGCGGCGAC GCGGCTGCTC
GCGCATCGGC GGCGGCGCGC GCCGCGCGGC GACGATGCGA CGCGCGCGAG CGCCGCGCAG
CCGGCGGCGG GCGGGCCGCG ATAG
|
|---|
| Protein sequence | MDLSILANNL PYLLVGAFPD GSLGGAALSL VLALASALAS AGLGVALGVA LALATGALRG
ALVVVIGFFR AIPVLMLIFW TYFLLPVLLH ADVPGLAAVV CALSLVGGAY LAHSVHAGIR
AAGDGQWQAG LALGLTRWQT VRHVLLPQAV RIMTPSFVNQ WVSLVKDTSL AYIVGVPELS
FVATQVNNRL MVYPAQIFLF VGVIYLILCT ALDVAATRLL AHRRRRAPRG DDATRASAAQ
PAAGGPR
|
|---|
| |