Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1640 |
Symbol | rbsC |
ID | 4681022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1634258 |
End bp | 1635262 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639845907 |
Product | carbohydrate ABC transporter permease |
Protein accession | YP_992966 |
Protein GI | 121599153 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.367254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGACC GGACGGCCGC GCCGTCTGCC TCTTGCGCGC CCGCCGCCGC GAGCCCCGCT CGGGCCACGG GCCCCGCGCT CGCCGCGCTG CGGCGCTCGA CGACGTTCTA CCCGCTCGTC GGGCTCGTCG CCGTGTGCGT CGCGATGGTG TTCGCGAGCG ACAGCTTCCT GAGCGCGGCG AACCTCGAGA ACGTGCTGCG GCAGGTGTCG ATCAACGCGA TCATCGGCGT CGGGATGACC TGCGTGATCC TGACGGGCGG CATCGACCTG TCGGTCGGCT CGGTGATGGC GCTGTCCGGC ACGCTCGCGG CGGGCCTTCT CGTCGCGGGC GCGAACGGCG CGGCGGCGCT TGCCGCGGGC ATCGGCGTCG GGGTCGCGCT CGGCGCGGCG AACGGCCTGT TCGTCGCGTT CGCCGGCATG CCGCCCATCA TCGTCACGCT CGCGACGATG GGCATCGCGC GCGGCCTCGC GCTCATCTAC ACGGGCGGCT ACCCGATCGA CGGGCTGCCC GACTGGGTCC GCTTCTTCGG CAGCGGCAAG GTGCTCGGCG TGCAAATGCC CGTGCTGACG ATGCTCGCGG TCTACGCGCT CGCGTGGCTG ATGCTCGAGC GCATGCCGTT CGGCCGCTAC GTCTACGCGA TCGGCGGCAA CGAGCACGCG ACGCGGCTCT CGGGCGTGCG CGTGTCGCGC GTGAAGCTGG CCGTCTATAC GTTCGCGGGG CTCACGTCCG CGCTCGCCGC GCTCGTGCTG ACGGGCCGCC TGATGAGCGG GCAGCCGAAC GCGGGGGGCG GCTTCGAGCT CGACGCGATC GCCGCCGTCG TGATGGGCGG CACGTCGATC GCGGGCGGCC GCGGCTCGAT CGTCGGCACG CTTGTCGGCG CGCTGCTGCT CGGCGTGCTG AACAACGGCC TGAACATGAT CGGCGTGAAT CCCTACGTGC AGAACGTGAT CAAGGGCGCC ATCATCCTGC TCGCGATCTA CATCGGCCGC GAGCGCCGCA CGTGA
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Protein sequence | MHDRTAAPSA SCAPAAASPA RATGPALAAL RRSTTFYPLV GLVAVCVAMV FASDSFLSAA NLENVLRQVS INAIIGVGMT CVILTGGIDL SVGSVMALSG TLAAGLLVAG ANGAAALAAG IGVGVALGAA NGLFVAFAGM PPIIVTLATM GIARGLALIY TGGYPIDGLP DWVRFFGSGK VLGVQMPVLT MLAVYALAWL MLERMPFGRY VYAIGGNEHA TRLSGVRVSR VKLAVYTFAG LTSALAALVL TGRLMSGQPN AGGGFELDAI AAVVMGGTSI AGGRGSIVGT LVGALLLGVL NNGLNMIGVN PYVQNVIKGA IILLAIYIGR ERRT
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