Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1622 |
Symbol | |
ID | 4681099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1599940 |
End bp | 1602150 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639845889 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_992948 |
Protein GI | 121600238 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTGGG CAACCAGCAC GCGCGTGCGT GCGATCGCGG CCGGCGTGGC GTTCTACGCG GCGGCGGCGG GTCATGCGCA GGCACAGGCG GCGCAGCCGG GGGCGGACGC GCGGCAGCCG GGCGGCGAGG CGAAGGCAGA CACCGCGGCG GGCGGCACGT TGCCCGCGAT CTCGGTGTCG GGAGCAGCGG AGCGCGACGC GAGCGTCGGC CTCGTCGCGC GGCGCAGCAT GACGGGCACG AAAACGGATA CGCCGATCAT CGAGATTCCA CAGACGATCA ACGTCGTCAC CGCGCAGCAG ATCGAGGCGA CGGGCGCGAC CGACATCAAT CAGGCGTTCC GCTACATTCC GGGCTTCTCG AGCTACGGGT CGGACAACCG TTCGGACTGG TACGCGGCGC TGCGCGGCTT CACGCCGACC GTGTTCGTCG ACGGGCTGCA GGTGCCGAAC ACGATCAACC TGTCGAGCTG GCGCGTCGAT CCGTACATGA TCGACAGCAT CGCCGTGCTG CGCGGCCCGA CGTCGGTGCT GTACGGGCAG GGCGATCCCG GCGCGATCGT CGACGTGCAG AGCAAGCTCG CGAACGGCGA GCGCATCCGC GAGCTCGGCG TGCAGGTCGG CAACTACGCG CGCAAGCAAC TGATGTTCGA CATCGGCGAC ACGATCGGCA AGGACGGCAC GCTGTCGTAC CGGATCGTCG GCGTCGGCCG CGACGGCAAC GCGCAGACGG GGCCGCTCGC CGACCAGCGC GTGTCGTTCG CGCCGTCGCT CAAATGGCAG CCGAACGCGG ACACGTCGCT CACCCTCGCC GCGACGTACC TGCAGGACTG GGGGGACACG TCGAGCAACT TCCTGCCGTC GCGCGGCACC GTGCTGCCGA ATCCGAACGG CACGATCTCG GACGACCTGT ACACGGCCGA TGCGAACTTC GACCATTACC GCAAGAAGCA GTGGTCGCTC GGCTATCAGT TCGAGCACAA GCTGAACCCG GTGTGGACGC TGCGGCAGAA CGTGCGCTGG ATGCACCTGT CGCTCGACGA CGCGTCCGTC TACGGCGGCG GCCTCGACGA CGCAGACCCG ACGATGGCGA CGATGACGCG CTACGCGGGC CTGTTCCAGT TCAACTACAG CCGCTTCGAC GTCGACAACC AGGCGCAGGC GAAATTCACG ACGGGCCCGC TTTCGCACAC GCTGCTGTTC GGCTTCGACT ACAACCGCCA GACGACGACC GATAGCGAAT GGCTCGCGAA GGGGCCGAGC CTGAACCTGT ACCGGCCCGT CTACACGCCG ATTCCGTCCG ACATCTTCAG CGGGCCGAAC GCGTCGCGCA CCGACACGAA GACGACGCTG AACGCATTCG GCCTGTACGT GCAGGACCAG ATCAAGTGGC GGCGCTGGGT GCTCACGCTC GGCGGCCGGC AGGACTGGAC GCGCACGTCG CAGGACGACA TCGCGAACGC GGCGAGCTTC AGGCAGAACG ACCACGCGTT CAGCGGGCGC GTGGGCCTCA CGTATCTCGG CGACTACGGG CTCGCGCCGT ACCTCAGCTA TTCGACGTCG TTCAATCCGC AGATCGGCCT GAAGCTCGCG GGCGGCGGGC TCGCGACGCC GACCAAGGGC CGCCAGATCG AGGCGGGCCT GCGCTGGCAG CCGCCCGGCA AGAACCTGAT GCTGAACGCG GCCGTCTACC AGATCAACCA GACGAACGTC GCGATGAGCA ATCCGAACGA CCCGACGAGC AGCACGTTCG TGCAGGTGGG CGAGGTGCGC TCGCGCGGCG TCGAGCTGAG CGCGGTGGGC AACCTGTCGC GCGAGCTGTC GGTGATCGCC GCGTACGTCT ATCAGGACGT GAAGAACGTG CGGGCGAACG ACAACACGCT GAACAAGTGG CCCGTCGACG TGCCGCGGCC GCGCCAGATC GCGTCGCTGT GGGCCGACTG GACGTGGCGC ACCGGGCCGC TCACGGGCTT CGGCGTCGGC GCGGGCGTGC GCTACATGAG CGCGGCGGCG GGCGCGGTCG ACAATTCGCT CACGGTGCCG AGCTACACGC TGTTCGACGC GGCGCTGCAC TACGAGCTGC GCAACTGGCG TTTCGCGCTC AACGCGACGA ACCTGTTCAA CCGCCGCTAC GTGGCCGGCT GCCAGTCGGA TGCGGTGTGC ATGTACGGCA ACCAGCGCAC CGTGATCGCG ACCGCGAAAT ACAACTGGTA A
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Protein sequence | MEWATSTRVR AIAAGVAFYA AAAGHAQAQA AQPGADARQP GGEAKADTAA GGTLPAISVS GAAERDASVG LVARRSMTGT KTDTPIIEIP QTINVVTAQQ IEATGATDIN QAFRYIPGFS SYGSDNRSDW YAALRGFTPT VFVDGLQVPN TINLSSWRVD PYMIDSIAVL RGPTSVLYGQ GDPGAIVDVQ SKLANGERIR ELGVQVGNYA RKQLMFDIGD TIGKDGTLSY RIVGVGRDGN AQTGPLADQR VSFAPSLKWQ PNADTSLTLA ATYLQDWGDT SSNFLPSRGT VLPNPNGTIS DDLYTADANF DHYRKKQWSL GYQFEHKLNP VWTLRQNVRW MHLSLDDASV YGGGLDDADP TMATMTRYAG LFQFNYSRFD VDNQAQAKFT TGPLSHTLLF GFDYNRQTTT DSEWLAKGPS LNLYRPVYTP IPSDIFSGPN ASRTDTKTTL NAFGLYVQDQ IKWRRWVLTL GGRQDWTRTS QDDIANAASF RQNDHAFSGR VGLTYLGDYG LAPYLSYSTS FNPQIGLKLA GGGLATPTKG RQIEAGLRWQ PPGKNLMLNA AVYQINQTNV AMSNPNDPTS STFVQVGEVR SRGVELSAVG NLSRELSVIA AYVYQDVKNV RANDNTLNKW PVDVPRPRQI ASLWADWTWR TGPLTGFGVG AGVRYMSAAA GAVDNSLTVP SYTLFDAALH YELRNWRFAL NATNLFNRRY VAGCQSDAVC MYGNQRTVIA TAKYNW
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