| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1563 |
|---|
| Symbol | |
|---|
| ID | 4678684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1536416 |
|---|
| End bp | 1537477 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639845830 |
|---|
| Product | JmjC domain-containing protein |
|---|
| Protein accession | YP_992889 |
|---|
| Protein GI | 121600125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000100796 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCCA GTATTCGGTC TGGATGGACG GGCGAAGCCT TCCCGCCGGT TGGGAAACGG
TCGGCGAACC TGCGACGAAG CAACAGTGTC TGCAACGCAT CGAGCAACTC TGGACGGACA
TGGTGCCTGC CAGCGTCCGC GAGCATCTCA ATCAACATTC GGGCCCGGGA ATCGACTATG
CCGTACGATG AAATTCTGCC TATTGAAACG CTGGTTCGAC CCAAAGTATC GGACTTCCGC
GAGCATTACC TCGAAAAAGA GCGCCCGGTG AAAATCGCGA GGGCGCTCGA TGCGTGGCCG
GCGATGCAGA AATGGTCGCT CGACTATTTC GAGAATCGTT TCGGCGACGA GACCATCGGC
GTCGAGAGCT TTCAGCCTGA CGAGCGCGGG CCCGGCAACA ACAGCCCGCA AGGTTACGTC
AAGCACTTGC GTTTCCAGGA GCTCAAGCTC AAGGAACTGA TCCGGATCCT GCGAACGAAG
CCGGACCACA TGTACTACAT GGCGTCGCAT CCGTTTCGCA AGAGCTTTCC GAACCTGCGC
GCCGATCTCG CGCCGCATCC GTATGTGCAG GGGCATATCG AGCACATCCC GGGTGCGCAC
ATGGATTCGT ACCTGTGGAT CGGGCCGGCC GGCACGCATA CGCCGATCCA CACCGATCCG
ATGCCGAATT TCCTCACGCA GATCGTGGGC CGGAAGATGG TGTATCTGTT CCCGCCGGAT
CAGGCCAGCA AGAACCTCTA TATCGGCCAG TTCGAGCGCG AGACGTTCAG TCCGGTGGAT
TTGGAGAAGC CGGATCTCGA GCGCTATCCG AACTACCGGC ACTGCACGCC GTACCAGGCG
ATCATCGAGC CGGGCGAGAC GCTGCACATT CCGCGCAACT GGGGGCACTG CGTGATCTCG
ATGGATATCT CGATTTCCAT CAGCACGTTC TTCATCACGT ATCCGCAGCT GTTTCGCCTG
GTGCCCGAAT TCTTCACCCA ATACGTGAAG CGGGCGTTCG AGGGCTGGCG CTGGAAGGGC
ATGGAAAACG AGCGGGCCGG CCTGAATCCG CCCCCGCGCT GA
|
|---|
| Protein sequence | MRASIRSGWT GEAFPPVGKR SANLRRSNSV CNASSNSGRT WCLPASASIS INIRARESTM
PYDEILPIET LVRPKVSDFR EHYLEKERPV KIARALDAWP AMQKWSLDYF ENRFGDETIG
VESFQPDERG PGNNSPQGYV KHLRFQELKL KELIRILRTK PDHMYYMASH PFRKSFPNLR
ADLAPHPYVQ GHIEHIPGAH MDSYLWIGPA GTHTPIHTDP MPNFLTQIVG RKMVYLFPPD
QASKNLYIGQ FERETFSPVD LEKPDLERYP NYRHCTPYQA IIEPGETLHI PRNWGHCVIS
MDISISISTF FITYPQLFRL VPEFFTQYVK RAFEGWRWKG MENERAGLNP PPR
|
|---|
| |