| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1549 |
|---|
| Symbol | |
|---|
| ID | 4680526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1523871 |
|---|
| End bp | 1524512 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639845816 |
|---|
| Product | 3-oxoacid CoA-transferase subunit B |
|---|
| Protein accession | YP_992875 |
|---|
| Protein GI | 121598269 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGGA ATCGTGACCA GATGGCCGCG CGCGCGGCGA AGGAATTGCA GGACGGCTTC
TACGTGAACC TCGGCATCGG GCTGCCGACG CTCGTGGCGA ACCACGTGCC GGCGGGCGTC
GAGGTGTGGC TGCAATCGGA GAACGGCCTG CTCGGCATCG GTCCGTCGCC GACCGAGGAC
GAAGTCGACG CGGATCTCAT CAATGCCGGC AAGCAGACGG TGACGACGCT GCCGGGCTCG
TCGATCTTCT CGTCGGCCGA TTCGTTCGCG ATGATCCGCG GCGGCCACAT CAACCTCGCG
ATCCTGGGCG CGATGCAGGT CAGCCAGCGC GGCGACCTCG CGAACTGGAT GATTCCCGGC
AAGATGATCA AGGGAATGGG CGGCGCGATG GATCTCGTCG CGGGCGTGAA GCGCGTCGTC
GTGCTGATGG AGCATGTCGC GAAGGGCGAC CAGCACAAGA TCCTCGAGCA ATGCACGCTG
CCGCTGACGG GCGTGGGCGT CGTCGACCTG ATCATCACCG ATCTCGGCGT GATCGAAGTG
ACGCCGAATG GCTTGAAGGT GCTCGAGCTT GCCGACGGCG TCACCGTCGA CGAGATCCAG
ACGAAGACGG GCGCGCCGCT CGACGTGAGC GCGCTCGCGT AA
|
|---|
| Protein sequence | MAWNRDQMAA RAAKELQDGF YVNLGIGLPT LVANHVPAGV EVWLQSENGL LGIGPSPTED
EVDADLINAG KQTVTTLPGS SIFSSADSFA MIRGGHINLA ILGAMQVSQR GDLANWMIPG
KMIKGMGGAM DLVAGVKRVV VLMEHVAKGD QHKILEQCTL PLTGVGVVDL IITDLGVIEV
TPNGLKVLEL ADGVTVDEIQ TKTGAPLDVS ALA
|
|---|
| |