Gene BMASAVP1_A1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1504 
Symbol 
ID4679304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1480122 
End bp1481681 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content67% 
IMG OID639845773 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_992834 
Protein GI121599006 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGC CACACGCCCC CCTTCCTCCG CTCGCGGGCG GACAACTGAT ACTCGGCACG 
ATCGCGGTAT CGCTCGCCGT GTTCATGAAC GTGCTCGACA CGTCGATCGC CAACGTCGCG
ATCCCGACGA TCTCGGGCGA CCTCGGCGTA TCGTCCGACC AGGGCACCTG GGTCATCACG
TCGTTCGCGG TCGCGAACGC GATCTCGGTG CCGCTCACCG GCTGGCTCAC CGATCGCATC
GGCCAGGTGC GCCTGTTCCT CGCGTCGATC ATCCTGTTCG TGATCTCGTC GTGGATGTGC
GGCCTCGCGC CGACGCTGCC GTTCCTGCTC GCGTCGCGCG TGCTGCAGGG CGCGGTCGCC
GGGCCGATGA TCCCGCTGTC GCAAGCGTTG CTGCTGTCGA GCTATCCGCG CGCGAAAGCG
CCGATGGCGC TCGCGCTATG GTCGATGACG ACGCTGATCG CGCCGGTGGC GGGCCCGATT
CTCGGCGGCT GGATCTCGGA CAACTACTCG TGGCCGTGGA TCTTCTACGT GAACATTCCG
GTCGGCATCG CGGCCGCGGC CGTCACGTGG ATGATCTACC GCAGCCGCGA ATCGGCCGTG
CGCCGCGCGC CGATCGACGG CGTCGGGCTC GCCCTCCTCG TGATCTGGGT CGGCTCGCTG
CAGATCATGC TCGACAAGGG CAAGGACCTC GACTGGTTCG CGTCGACGAC GATCGTCGTG
CTCGCGCTCA CCGCGCTGAT CGCGTTCGCG TTCTTCGTCG TCTGGGAATT GACGGCCGAG
CATCCGGTCG TCGACCTGTC GCTGTTCCGG ATGCGCAACT TCTCCGGCGG CACGATCGCG
CTGTCGGTCG GCTACGGGCT CTACTTCGGC AACCTCGTGC TGCTGCCGCT GTGGCTGCAG
ACGCAGATCG GCTACACGGC GACCGACGCG GGGCTCGTGA TGGCGCCCGT CGGCTTCTTC
GCGATCCTGC TGTCGCCGCT CACGGGCAAG TTCCTGTCGC GCACCGATCC GCGCTACATC
GCGACGGCCG CGTTCCTCAC GTTCGCGCTG TGCTTCTGGA TGCGCTCGCG CTATACGACG
GGCGTCGACG AATGGTCGCT GATGGCACCG ACCTTCGTGC AGGGGATCGC GATGGCGGGC
TTCTTCATCC CGCTCGTATC GATCACGCTG TCCGGCCTGC CGGGCCACCG GATTCCGGCC
GCGTCGGGCC TGTCGAACTT CGTGCGGATC ATGTGCGGCG GCATCGGGAC GTCGATCTTC
CAGACCGCGT GGGACCATCG GAACAACTTC CATCACGCGC AGCTCGTCGA GCAGGCGAAC
CCGTACAACC CGACGTTCAA CCAGGCGGTC ACGCAGATGG GGCAGCTCGG GTTCACGCGC
GACCAGGCGC ACGGGCTCAT CAACAACATG GCGACGCAGC AGGCCGCGCA GTTGGGCGTG
AACGATCTGT TCTACATCTC GGCGGCGATC TTCGTGCTGC TGATCGCGCT CATCTGGATC
ACGAAGCCCG AGCGCGCGGG CGGCGGCGAT TCGAGCGCGG CGGCGTCGGC CGCGCACTGA
 
Protein sequence
MAQPHAPLPP LAGGQLILGT IAVSLAVFMN VLDTSIANVA IPTISGDLGV SSDQGTWVIT 
SFAVANAISV PLTGWLTDRI GQVRLFLASI ILFVISSWMC GLAPTLPFLL ASRVLQGAVA
GPMIPLSQAL LLSSYPRAKA PMALALWSMT TLIAPVAGPI LGGWISDNYS WPWIFYVNIP
VGIAAAAVTW MIYRSRESAV RRAPIDGVGL ALLVIWVGSL QIMLDKGKDL DWFASTTIVV
LALTALIAFA FFVVWELTAE HPVVDLSLFR MRNFSGGTIA LSVGYGLYFG NLVLLPLWLQ
TQIGYTATDA GLVMAPVGFF AILLSPLTGK FLSRTDPRYI ATAAFLTFAL CFWMRSRYTT
GVDEWSLMAP TFVQGIAMAG FFIPLVSITL SGLPGHRIPA ASGLSNFVRI MCGGIGTSIF
QTAWDHRNNF HHAQLVEQAN PYNPTFNQAV TQMGQLGFTR DQAHGLINNM ATQQAAQLGV
NDLFYISAAI FVLLIALIWI TKPERAGGGD SSAAASAAH