| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1497 |
|---|
| Symbol | sucB |
|---|
| ID | 4681577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1469979 |
|---|
| End bp | 1471253 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639845766 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_992827 |
|---|
| Protein GI | 121598930 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.318189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCG TAGAAGTCAA AGTCCCCCAG CTTTCGGAGT CGGTTTCGGA AGCGACCATG
CTGCAGTGGA AGAAGAAGCC CGGCGAAGCC GTCGCGCAGG ACGAAATCCT GATCGAGCTC
GAGACGGACA AGGTCGTCCT CGAAGTGCCG GCGCCGGCCG CGGGCGTGCT CGCGCAAGTG
CTGCAGAACG ACGGTGACAC GGTCGTCGCC GACCAGGTGA TCGCGACCAT CGACACCGAA
GCGAAGGCAG GCGCCGCCGC GGCAGCGGCA GGCGCCGCCG ACGTTCAGTC GGCCGCCGCT
CCCGTCGCCG CGCCGGCGCC CGCCGCGCAG CCGGCCGCCG CCGCGTCGAG CACCGCGGCC
ACATCGCCCG CCGCGTCGAA GCTGATGGCC GAGAAGGGCA TCGGCGCCGG CGACGTCGCC
GGCTCGGGCC GCGACGGCCG CATCACGAAG GGCGACGTGC TGTCCGCGGG CAGCGCGCCG
AAGGCAGCGC CGGCCGCCGC GCCGGCGAAG GCCGCCGCGA AGCCGGCGCT GCCGGAAGTG
AAGGTGCCGG CATCGGCGAC GACGTGGCTC AACGACCGTC CGGAGCAGCG CGTGCCGATG
TCGCGCCTGC GCGCGCGCAT CGCCGAGCGT CTGCTCGAAT CGCAGCAGAC CAACGCGATC
CTCACGACGT TCAACGAAGT GAACATGCAG CCGGTGATGG ACCTGCGCGC GAAGTACAAG
GACAAGTTCG AGAAGGAGCA CGGCGTGAAG CTCGGCTTCA TGTCGTTCTT CGTGAAGGCG
GCCGTTCACG CGCTGAAGAA GTTCCCGCTC GTGAACGCGT CGATCGACGG CAACGACATC
GTCTACCACG GCTACTTCGA CATCGGCATC GCGGTCGGTT CGCCGCGCGG CCTCGTCGTG
CCGATCCTGC GCAACGCGGA TCAGCTGAGC CTCGCCGAGA TCGAGAAGAA GATCGCCGAA
TTCGGCCAGA AGGCAAAGGA CGGCAAGCTG TCGATCGAGG AAATGACGGG CGGCACGTTC
TCGATCTCGA ACGGCGGCGT GTTCGGCTCG ATGCTGTCGA CGCCGATCAT CAACCCGCCG
CAGTCGGCGA TCCTCGGCGT GCACGCGACG AAGGAGCGCC CGGTCGTCGA GAACGGCCAG
ATCGTGATCC GCCCGATCAA CTATCTTGCG CTGTCGTACG ACCACCGGAT CATCGACGGT
CGCGAAGCGG TGCTGTCGCT TGTCGCGATG AAGGACGCGC TCGAAGATCC GGCGCGCCTG
CTGCTCGACC TGTAA
|
|---|
| Protein sequence | MAIVEVKVPQ LSESVSEATM LQWKKKPGEA VAQDEILIEL ETDKVVLEVP APAAGVLAQV
LQNDGDTVVA DQVIATIDTE AKAGAAAAAA GAADVQSAAA PVAAPAPAAQ PAAAASSTAA
TSPAASKLMA EKGIGAGDVA GSGRDGRITK GDVLSAGSAP KAAPAAAPAK AAAKPALPEV
KVPASATTWL NDRPEQRVPM SRLRARIAER LLESQQTNAI LTTFNEVNMQ PVMDLRAKYK
DKFEKEHGVK LGFMSFFVKA AVHALKKFPL VNASIDGNDI VYHGYFDIGI AVGSPRGLVV
PILRNADQLS LAEIEKKIAE FGQKAKDGKL SIEEMTGGTF SISNGGVFGS MLSTPIINPP
QSAILGVHAT KERPVVENGQ IVIRPINYLA LSYDHRIIDG REAVLSLVAM KDALEDPARL
LLDL
|
|---|
| |