| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1479 |
|---|
| Symbol | |
|---|
| ID | 4681690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1450078 |
|---|
| End bp | 1451892 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639845749 |
|---|
| Product | major facilitator family protein |
|---|
| Protein accession | YP_992810 |
|---|
| Protein GI | 121599776 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.305606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC CTTCCATTAC GTCGACCGCG CGGCGCGAGA AGCGCCGCGC CCATCCGTCG
CAGTTCGATC TGCTGCGCGA GCGCCGCTTC GCGCCGTTTT TCGCGACGCA GTTCATGGGC
GCGCTGAACG ACAACGTCTT CAAGATCGGC TTTACCTCGC TCGTCACCTA TCAGACGGCG
AAATTCAGCG GCGTCGATCC GAAGACGGCC GCGTTCCTGA TCTCGGCGAT CTTCATCCTG
CCGTTCGTGC TGTTCTCGGC GACGGCCGGG CAGCTCGCCG ACAAGTACGA CAAGGCGCGC
CTCACGCGCT TCGTGAAGAG CTTCGAGATC GCGCTGATGG CGGTCGGCGC GGCGGGCTTC
GTCACGCACG GCGCGCCGCT GCTGTACCTG TGCACGTTCA TGATGGGCAT GCATTCGACG
CTGTTCGGCC CCGTCAAGTA TTCGTACCTG CCGCAGCATC TGAACGATCA TGAGCTCGTC
GGCGGCAACG GGCTCGTCGA GATGGGCACG TTCGTCGCGA TCCTGATCGG CACGATCGTC
GGCGGCGCGG CGGCGGGCAT CTCCGGGCGC GGCGAGCTGC TGCTCGCCGT CTGCTGCGTC
GGCATCGCGC TCGTCGGGCG CGTCGCGGCG GCGGGCGTGC CGGCGACGCC CGCGCCGCAG
CCGAAGCTCG CGATCAACTG GAACCCGTTT TCCGAGACGT GGCGCAACCT GAAGCTCGCG
CGCGAGAACC GGACGGTGTT CCTGAGCCTG CTCGGCATTT CGTGGCTGTG GTTCGTCGGC
GCGACGTTCC TCACGTCGTT CTTCGGCTTC GCGAAGGACG TGCTGTCGGC GAACCCGGAT
GTCGTCACCG TGCTGCTCGC GACGTTCTCG TTCGGCATCG GCCTCGGCTC GCTGCTGTGC
GAGCGGTTGT CGCGGCGGCG CGTCGAGATC GGGCTCGTGC CGCTCGGCTC GCTCGGCATC
AGCGTGTTCG CGATCGAGCT GTACTTCGCG AGCCACGCGC TGCCCACGCA GACGCATCTG
CTGACGATCG GCGAGTTTCT CGGCCACGCG GCGCACTGGC GGATCCTCGC CGACCTGTTC
CTGCTCGCGA TGTTCGGCGG CTTCTACAGC GTGCCGCTCT ATGCGCTGAT CCAGAGCCGC
AGCGCGCCCA CGCACCGCGC GCGGATCATC GCCGCGAACA ACATCCTGAA CGCGCTCTTC
ATGATCGTGT CGGCGCTGAT GGCGATGCTG CTCACGAAGG CGGGCGTCAG CATCCCGGGG
ATCTTCCTCG TGACCGCGCT GCTGAACGTC GTCGTCGCGT CGTACATCTA CTCGCTCGTG
CCCGAGTTCC TGCTGCGCTT CATCGCATGG GCGCTCGTGC ACACGTTCTA CCGGATCCGC
CTCGTGCACG CGGAGCGGAT TCCGGACGAG GGCGCGGCGC TCCTCGTCTG CAACCACGTG
AGCTATGTCG ACGCGCTCGT GCTCGCGGCC GCGAGCCCGC GGCCGATCCG CTTCGTGATG
GATCACCGGA TCTTCAACAC GCGCTTCGCG AGCTGGGCGT TCCGTCACGC GAAGGCGATT
CCGATCGCGC CGCGCCACGA GGACCCCGAG ATGCTCGCGC GCGCGTACGA CGCGTGCGAG
GCGGCGCTGC GTGAAGGCGA GCTCGTCTGC ATCTTCCCGG AAGGCAAGCT GACGAAGACG
GGCGACGTCA ACACGTTTCA CCACGGCGTC ACCGAGATCC TGACGCGCGC GCGCCCGTCG
TGCCGATGGC GTTGCGCGGA CTATGGGGCA GCGTGTTTTC GCGGCACGAG GACGCGCGCT
GGCCGCGCCC GGTGA
|
|---|
| Protein sequence | MSDPSITSTA RREKRRAHPS QFDLLRERRF APFFATQFMG ALNDNVFKIG FTSLVTYQTA
KFSGVDPKTA AFLISAIFIL PFVLFSATAG QLADKYDKAR LTRFVKSFEI ALMAVGAAGF
VTHGAPLLYL CTFMMGMHST LFGPVKYSYL PQHLNDHELV GGNGLVEMGT FVAILIGTIV
GGAAAGISGR GELLLAVCCV GIALVGRVAA AGVPATPAPQ PKLAINWNPF SETWRNLKLA
RENRTVFLSL LGISWLWFVG ATFLTSFFGF AKDVLSANPD VVTVLLATFS FGIGLGSLLC
ERLSRRRVEI GLVPLGSLGI SVFAIELYFA SHALPTQTHL LTIGEFLGHA AHWRILADLF
LLAMFGGFYS VPLYALIQSR SAPTHRARII AANNILNALF MIVSALMAML LTKAGVSIPG
IFLVTALLNV VVASYIYSLV PEFLLRFIAW ALVHTFYRIR LVHAERIPDE GAALLVCNHV
SYVDALVLAA ASPRPIRFVM DHRIFNTRFA SWAFRHAKAI PIAPRHEDPE MLARAYDACE
AALREGELVC IFPEGKLTKT GDVNTFHHGV TEILTRARPS CRWRCADYGA ACFRGTRTRA
GRAR
|
|---|
| |