| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1469 |
|---|
| Symbol | |
|---|
| ID | 4680207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1442576 |
|---|
| End bp | 1443517 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639845739 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_992800 |
|---|
| Protein GI | 121599164 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC TCCAAAACAT GCGCGTGTTC GTCCGCGTGG TCGATGCGGG CAGTTTCACG
GCGGCCGCGC AGCAGCTCAA TTCGACGACC GCGTACGCAT CGCGCGCGGT GTCCGATCTC
GAGGCGCACT TGCGCACGCG TCTTCTGAAC CGGACGACGC GGCGCATCGC GCTCACCGAG
GCGGGCGAGC GTTATCTGCA GCGCTGCGAG CAGATCCTCG CGTACGTCGA GCAGGCGGAG
GCCGAGGCAA GCGACGCGCA CGCGCGCCCG TCCGGCAAGC TGAAAGTGCA CTGCATGACG
AGCCTCGGCC AGCACTACAC GGTGCCCGCG GTGTCGCGCT ACCGGCAGCG CTATCCGGAA
GTCCAGGTCG ACCTGACGCT CGCGCAGCGG CTGCCGGATC TGCTCGACGA AGGCTTCGAC
GTGTCGCTCG TCGTCGGCCG GGAGCTGCCC GATTCGGGGC TCGTGTCGCA GCGGCTCGGC
GAGACGTTCA GCGTCGTCTG CGCGTCGCGC GGCTACATCG AGCAGCACGG CGCGCCGCAG
CGGCCGCAGG ATCTTGCCGG CCACGTCTGC CTCGGGATGG TCGCGCCGGG CCTGTACTGG
GACGAATGGA AGCTGGTGGG GCCGCAGGGC GAGCAGAGCG TGACGCTCGC GCCGCCGCCG
TTTCGCGTGA ACGTCGCCGA GGCGCTCGCG GCCGGCATTC GCGAGGGCAT GGGCATCGGC
GTGCTGCCGC TCTATTCGGC GATCGCCGGG TTGCGCAACG GCGATTTCGT GCGCGTGATG
CCCGAATACC GGTCGCACGT GATGAACATC TACGCGCTCT ACGCGTCGCG CCAGTATCTC
GACGCGAAGA TCCGCACGTG GGTCGATTTC CTGCGCGACG AGTTGCCGTC GATCCTCGAA
GCCGACGAGG CGGCGCTCGA GCGCTTCACC GTGCAGACCT GA
|
|---|
| Protein sequence | MDTLQNMRVF VRVVDAGSFT AAAQQLNSTT AYASRAVSDL EAHLRTRLLN RTTRRIALTE
AGERYLQRCE QILAYVEQAE AEASDAHARP SGKLKVHCMT SLGQHYTVPA VSRYRQRYPE
VQVDLTLAQR LPDLLDEGFD VSLVVGRELP DSGLVSQRLG ETFSVVCASR GYIEQHGAPQ
RPQDLAGHVC LGMVAPGLYW DEWKLVGPQG EQSVTLAPPP FRVNVAEALA AGIREGMGIG
VLPLYSAIAG LRNGDFVRVM PEYRSHVMNI YALYASRQYL DAKIRTWVDF LRDELPSILE
ADEAALERFT VQT
|
|---|
| |