| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1439 |
|---|
| Symbol | |
|---|
| ID | 4679340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | + |
|---|
| Start bp | 1404558 |
|---|
| End bp | 1406825 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639845709 |
|---|
| Product | ABC transporter, permease/ATP-binding protein |
|---|
| Protein accession | YP_992770 |
|---|
| Protein GI | 121599860 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGAGG CGCTGGCGTG GCTCGCGTTC GTCGCGTTGC TCGTCGTGCC CGCCCTTGCG
TGGCCGCGCG GCTGGATGCT CGGCTATCTC GCGCAGACGG CGGCGATGAT CGTGCTCGCG
CTGTCGTACA ACCTGCTGCT CGGCACGACG GGGTTGCTGT CGTTCGGGCA CGCGGCGTTC
GCGGGGCTTG GCGCGTTCGT CGCCGCGCAC AGCTTCAATC GCTACGGCCT GCCGCTGCCG
CTCGTGCCGC TCGCGGGCGG TGCCGCGGGC GCGGCGTTCG GCGCGCTGTT CGGCTTCGTC
GCGACGCGCC GCGCGGGCAC CGCGTTCGCG ATGATCACGC TCGGGATCGG CGAGCTCGTC
GCGGCCGCCG CGTGGAGCGT GCCCGAGTGG TTCGGCGGCG CGGGCGGCGT GTCGATCGAC
CGCGCGGCGG GCCCCGCGCT CGCCGGGTGG GAGTTCGGCA AACCGATGCA TGCGTATGCG
TTGATCGCCG CATGGTGCGT CGTCGCGGCG GTGGCGATGC GGGTGCTCGT GCGCACGCGC
CTCGCGCGGC TCGCGAACGC GGTGCGCGAC AATCCGGCGC GCGTCGCCGC GCTCGGCACC
GATCCGTGCC GCGTGCGCTT CGCCATGGCG ATCGCGGCGG CGTTCTTTGC CGGCGTGGCG
GGCGCGCTGA CGCTGATCGA CGTCGAGGTC GCGACGGCGG AGAGCGTCGG GATGCTGCGC
TCGGGCGCGG TGCTGTTCGC GACGGTGATC GGCGGGACGA CGGCTTTTTT CGGCCCCGTC
GTCGGCGCGG TGTTGCTGAC GTTCTTCAGC GTGTTCGTCG CGAGCGTGTC GCGCGCGTGG
CTGCTGTACC TTGGGCTGCT GTTCGTCGCC GTGGTGCTGG CCGCGCCGGG CGGCGCGAGC
GGCCGGTGGC GCGCGTGGCG CGACGCGCGG CGGCACGGGG GCGCGCGCTT CGATGCGCGA
CGCGCGTTGC CCGGCGCGGG CGCGGCGCTC GCCGGCGGCG TCGCGATCGT GTTCGCCGCC
GAGCTCGCAT ATGCGCTGCA GTTCGCGCAG AACGATGCGC GGCGCGCGGT GATCGGGCCC
TGGCGATTCG ATGCGGGCGC GCCGCTCGGC TGGGGGATCG CGGCGCTCGC GGCGGCGCTC
GGCATGGGGC TCGCGCATGC GGCGCGACGG TGGGGGCGCG GCGCGCCTCG CACGAATGGG
CCGGCGTTTG CCGATGCGAT CGATACGTGC GGCGCGGCGT GCGGATCGGC GGAGCTGAAG
GCGCGCGATG CGGGCGATGT GGACGGTTCG ACAAACGCGG CGAGCGCGGC AAACGAGACC
AACGCGGTGA GCATTGCAAG CACGACAAGC ACGACAAGCA CGACAAGCAC GACAAGCACG
ACAAGCATGA CAAGCATGAC AAGCGCGACA AGTGCGACAA GCGCGCGTCG TGCCGCCCGC
GTGTCCGACA ATGCCCCGTC GCCGGTGTTC GAGGTCGCCG CCGAGCCCGT CGGCGGTGGC
GTGCACGCGG CGAGCGCGCC GCCCGCGCTG CGCATGGCGG ACGTGAGCAA ATCGTTCGGC
GCGACGCCGG TGCTCGTCGG CATCGATCTG ACGATCCGCC CCGGCGAGCG CCATGCGCTG
ATCGGCCCGA ACGGCGCGGG CAAATCGACG CTCTTCAATT TGATCGCGGG CGCGCTCGCG
CCGACGCGCG GCCGCATCGC GCTGAACGGC ATCGAGCTCG GGCGGCGGCG GCCGCATGCG
GTCGCGCGCC TTGGCCTCGC GCGTAGCTTT CAGCAGACGA GCGTGTTCGC GCGGATGAGC
GTCTACGACA ATCTGCGATG CGCGGCGTTG CACGCGCCGC GCGCGCGCCG CCGCTGGCGA
CGCGAGCCGG CCGCCGCGGC CGCGATCGAT CGCGCGGCCG ACGCCGCGCT CGCGTCGATC
GGCCTCGCCG CACATCGCGA CGCGCTCGCG GGCAGCCTGA GCTACGCGCA GCAGCGCGCG
CTCGACGTCG GGCTCGCGCT CGCGAGCGGC GCGTCGGTGT TTCTGTTCGA CGAGCCGACC
GCGGGGATGA GCCGCGAGCA GGCGCGGCGC ACGATCGAGC TGATCCGTCG CGCGACGGCG
GGCAAGACGG TGCTGATGAT CGAGCACGAC ATGGACGCGG TGTTCGGCTT CGCCGATCGC
GTGTCGGTGC TCGTGCGCGG CGAGCTGGTG GCCACCGGCT CGCCCGCGGC GATCCGCGCG
AACGCGGCCG TGCGCGCCGC GTATTTCGGC GAGGCGTTCG AGCGATGA
|
|---|
| Protein sequence | MPEALAWLAF VALLVVPALA WPRGWMLGYL AQTAAMIVLA LSYNLLLGTT GLLSFGHAAF
AGLGAFVAAH SFNRYGLPLP LVPLAGGAAG AAFGALFGFV ATRRAGTAFA MITLGIGELV
AAAAWSVPEW FGGAGGVSID RAAGPALAGW EFGKPMHAYA LIAAWCVVAA VAMRVLVRTR
LARLANAVRD NPARVAALGT DPCRVRFAMA IAAAFFAGVA GALTLIDVEV ATAESVGMLR
SGAVLFATVI GGTTAFFGPV VGAVLLTFFS VFVASVSRAW LLYLGLLFVA VVLAAPGGAS
GRWRAWRDAR RHGGARFDAR RALPGAGAAL AGGVAIVFAA ELAYALQFAQ NDARRAVIGP
WRFDAGAPLG WGIAALAAAL GMGLAHAARR WGRGAPRTNG PAFADAIDTC GAACGSAELK
ARDAGDVDGS TNAASAANET NAVSIASTTS TTSTTSTTST TSMTSMTSAT SATSARRAAR
VSDNAPSPVF EVAAEPVGGG VHAASAPPAL RMADVSKSFG ATPVLVGIDL TIRPGERHAL
IGPNGAGKST LFNLIAGALA PTRGRIALNG IELGRRRPHA VARLGLARSF QQTSVFARMS
VYDNLRCAAL HAPRARRRWR REPAAAAAID RAADAALASI GLAAHRDALA GSLSYAQQRA
LDVGLALASG ASVFLFDEPT AGMSREQARR TIELIRRATA GKTVLMIEHD MDAVFGFADR
VSVLVRGELV ATGSPAAIRA NAAVRAAYFG EAFER
|
|---|
| |