Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1430 |
Symbol | |
ID | 4680496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1397875 |
End bp | 1399515 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639845700 |
Product | peptidase s1, chymotrypsin:pdz/dhr/glgf |
Protein accession | YP_992761 |
Protein GI | 121600806 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.94162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTTGTCG GCTTCGCTTG CCTGCAGCCG ACGCCACTCG CCGCGGGTAC GCTGCAATCG CCGGCGAAGG CGAAGCGAAT CGCGCAGATC GGCGCCGCGG GGCCGGTCGA TTTTCCCACG CTCGTCGAGC GATACGGGCC CGCCGTCGTC AGCGTGAGCG TGCCTGCGCA GGATCCGCAG ATGTCGGCGT CCGGCCTCGA GGCGCTCGAT CCCGACGATC CGTTCTTCGC CTACTTCAAA TCCGCCGCCA CGCAGCCCGC GCTGTCGCCG GAGAACGGGC CGCGCGCGAT GGCGGGCGCC GGATCCGGTT TTATCGTCGG CGCGGACGGG ATCATCCTGA CGACCGCGTA CGTGGTCGGG CAGGCGAGCG AGGCGACGGT TCGCCTGATC GACCGGCGCG AATTCAAGGC GCGGGTGCTG GCCGTCGATG ATTCGAGCGA TGTGGCCGTG TTGCAGATCG ACGCGACGAA GCTGCCGACG GTGCGGCTCG GCGATTCGTC CCGGGTGCGC ACGGGCGAGC CGGTGCTGAC GATCGGTACG CCGGACGGCT CGGCGAACAC GGTGACGACG GGCATCGTCA GCGCGACGGC GCGCATGTTG CCCGACGGCG GCCGCTTTCC GTTCTTCCAG ACCGACGTGA CCGGCAACCT CGACAACTCG GGCGGCCCGG TGTTCAACCG CGCGGGCGAG GTGATCGGCA TCGACGTGCA GATCTACGGC AGCGGCGAGC GCAATCCGGG CGTGACGTTT GCGATTCCGA TCGACATGGC GATGAAGGTG CGTGCGCAGG TGCTGCAGGC GCAGCGCCAG GCGCGACAGC AGGCGCAGCC GCCGATGCAA CAGGCGCAAC AGGCGCAACA AGCGCCGCCC GCGGCGGCGC AGAACGCGCT GGGCGTCGAC GCGCAGGACG TCGGTCCGGG GCTCGCGGCG GCGTTCGGCC TGCCGCGGCC GGCGGGCGCG CTTGTCAATG CGGTGGAGCC GGGGTCGCCG GCGGCGGCGG TCGGGCTGAA GCCGGGCGAC GTGATCGTGC AGATCGGCGA TCGGCCGCTC GGCGGAACTG GCCGGCGACC TCGCGGCGCT GCCGCCCGGG GCGAGCGCGC CGATCACGCT GATCCGCAAC CGGATGCCGA TGACGGTGAT GCTCGGCTCC GGCGCGGCCG CGAGCGCGCC GACAGGCGCG ACCGCATCGC CGGGCAATGC GGCCGCCGGC CGCAGCGAGA CGGGCGGCGC GGACCGCCTG GGCCTGACGA TGCATCCGCT GACGGACGAC GAGCGGCGCT CGACGGGATT GCCCGTCGGC ATGGTGGTCG ATGCGGTGCG CGGGCCGGCG GCGAACGCGG GGATTCGGCC GGGCGACGTC GTGCTGGAGC TCGACGATAC GCTGATCGAG ACGCCGGACA TGGTGCCGGC GCTGGAGGCG AAGGCGGGGA AGGTGGTCGC GGTGCTGATT CAGCGGGGGA GCGAGCGCAG GTTCGTGTCG GTGAAGGCGC GGTGAAGCCG CGATGGAGGC GAAGCGCGCC GCCGGCGGTG CGCCATGCAC CGGGAGCCGG CGTCGCGGCA GCGCGGCGGC GCACGGCTCG CGCGCGGGCA ATCCGCCGCG TCGGCGAAGC GCGCGTGCGG AAGCATCGGG TCTTCCTCTG A
|
Protein sequence | MLVGFACLQP TPLAAGTLQS PAKAKRIAQI GAAGPVDFPT LVERYGPAVV SVSVPAQDPQ MSASGLEALD PDDPFFAYFK SAATQPALSP ENGPRAMAGA GSGFIVGADG IILTTAYVVG QASEATVRLI DRREFKARVL AVDDSSDVAV LQIDATKLPT VRLGDSSRVR TGEPVLTIGT PDGSANTVTT GIVSATARML PDGGRFPFFQ TDVTGNLDNS GGPVFNRAGE VIGIDVQIYG SGERNPGVTF AIPIDMAMKV RAQVLQAQRQ ARQQAQPPMQ QAQQAQQAPP AAAQNALGVD AQDVGPGLAA AFGLPRPAGA LVNAVEPGSP AAAVGLKPGD VIVQIGDRPL GGTGRRPRGA AARGERADHA DPQPDADDGD ARLRRGRERA DRRDRIAGQC GRRPQRDGRR GPPGPDDASA DGRRAALDGI ARRHGGRCGA RAGGERGDSA GRRRAGARRY ADRDAGHGAG AGGEGGEGGR GADSAGERAQ VRVGEGAVKP RWRRSAPPAV RHAPGAGVAA ARRRTARARA IRRVGEARVR KHRVFL
|
| |