Gene BMASAVP1_A1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1320 
Symbol 
ID4680824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1292160 
End bp1292861 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID639845592 
Productputative peptidoglycan-binding LysM/M23B peptidase 
Protein accessionYP_992653 
Protein GI121601016 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTGA AAACCACGAG ACGGCTCGTC GTCGCATCGC TCGCCGCGCT GCTCGCCGCG 
TGCGGCTCGG CGCCCGTCGG CCCCGGCTTC TACCGGGTCG AGCGCGGCGA CACGCTCTCC
AAGATCGCGC GATCGAATCG CCAATCGGTC GCGAATATCG CCCGCTGGAA CCAGATCACG
AATCCCGACG CGATCGAAGT CGGCCAGGTG CTGCGCGTCG CGCCGCCGCC GGGCACCGCG
TCGACCTCGG GCACGACGGG CGCATCGCGC GGCCCGAGCC GCCAGGCGCC CTCGTCGTCC
GCCACGTCGC CCGCGTCGTC CGTGAAACCG GCGTCGAGCA TCTCGCTCGT CTGGCCCGCC
GCCGGCAGTG TGATCCGCTC GTTCGACGGA TCGAAATCGA AAGGCATCGA CATCGCGAAC
ACCGCCGGCA CGCCGGTCAT CGCGGCGGCG GCCGGCACGG TCGTCTATGC GGGCAACGGC
CTGCGCGGCT ACGGCAACCT GCTGATCGTC AAGCACGACG CCGATTTCCT GACGACCTAC
GCGCACAACC GCGCGCTACT CGTGAAGGAA GGCCAGACGG TCGCGCAGGG GCAGAAAATC
GCGGAGATGG GCGATACCGA TAACGACCGC GTCGCGCTGC ACTTCGAGCT GCGCTACGGC
GGGCGCTCGA TCGATCCCGC GCGCTACCTG CCGTCGCGCT GA
 
Protein sequence
MLLKTTRRLV VASLAALLAA CGSAPVGPGF YRVERGDTLS KIARSNRQSV ANIARWNQIT 
NPDAIEVGQV LRVAPPPGTA STSGTTGASR GPSRQAPSSS ATSPASSVKP ASSISLVWPA
AGSVIRSFDG SKSKGIDIAN TAGTPVIAAA AGTVVYAGNG LRGYGNLLIV KHDADFLTTY
AHNRALLVKE GQTVAQGQKI AEMGDTDNDR VALHFELRYG GRSIDPARYL PSR