| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1276 |
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| Symbol | |
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| ID | 4679064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 1250770 |
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| End bp | 1252362 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639845549 |
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| Product | putative membrane-bound lytic murein transglycosylase D |
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| Protein accession | YP_992611 |
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| Protein GI | 121600674 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.633105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCC TCCTCAGTGC GCTATTGGTC CTGACGCTCG CCGCGTGCGC GGGCACCGGG
CCGACCGCCC AAAATCCCGC GGCCTCCGAC CCGCAAGCCG CTTCGGACTA CTTGCGCAAG
TCCGCTTCCG CGAAAGAAAC CGTCGACGTC GACAAGCAGT CGGTCGGAGA CCTCACCACC
GCCGACAGCG ATCTCTGGGC GCGCATCCGC CGCGGCTTCC AGATGCCCGA CCTGCAGAGC
GATCTCGTCG ACATGCAGGC GTCGTGGTAC GCGCAGCGCC CCGACTATGT GCAGCGGATG
ACCGAACGCT CGCAGAAGTA CCTGTACCAC ATCGTCGAGG AGCTCGAATC GCGCCACATG
CCGACCGAAC TCGCGCTGCT GCCGTTCATC GAATCGGCGT ACAACCCGCA GGCGCTGTCC
GTCGCGAAGG CGGCGGGGAT GTGGCAGTTC ATGCCGGCCA CGGGGCGCAC GTTCAACCTG
AAGCGCAACA TGTGGCAGGA CGAGCGGCGC GACGTGCTCG CGTCGACGAG CGCGGCGCTC
GATTACCTGT CGCGCCTGCA TGACATGTTC GGCGACTGGT ATCTCGCGCT CGCCGCGTAC
AACTGGGGCG AGGGCAATCT GCAGCGCGCG ATCGCGCGCA ACCAGGCGGC CGGGCTGCCG
ACCGATTACC AGAGCCTGCG GATGCCGAAC GAGACGCGCA ACTACGTGCC GAAGCTGCAG
GCGGTCAAGA ACATCGTGAC GAACCCGCAG CAGTACGGCC TCACGCTGCC GGAGATTCCG
AACCACCCGT ATTTCGTGAC GGTCACGACC TCGCGCGACA TCGACGTGAC GGTCGCCGCG
AAGCTCGCGA ATCTGCCGCT CGACGAATTC AAGTCGCTCA ACCCGTCGTT CTCGAAGCCC
GTGATTCTCG GTGCGACGCA GCCGCAGATC CTGCTGCCGT TCGATAACGC GGCGGCGTTC
GAGAAGGGGC TGAAGTCGTA CGACGGCCAG CTTTCGTCAT GGACGGCGTA TACGGTCACC
GAGCGCGCGC GGCCGGCCGC GATCGCGGAG AAGATCGGCG TCGATGCGGA TACGCTGATG
CAGGTGAACA AGATTCCGGC CGGCATGCGG CTGAAGCCCG GCTCGACGAT CGTCGTGCCG
CGCACCGACG ACGATGACGA GGACATCAGC GCCGACGTCG CCGAGAACGG CGTGCTCGCG
ATGGAGCCGG ACGTGCCCGA CACGCGCAAG ATGCTGATTC GCGTGCGCCG CAAGCAGTCG
ATGGAAGCGC TCGCGAGCCG CTACGGCGTG TCGGCCGCGC AACTGCGCGG ATGGAACCGC
ACGCGCCGCG CGGTCGTGAT GCCGGGCCAG ACGATGGTGC TGCACGTGCC CGTCGGTCGT
GCGGTGCCGG CCGAGCCGGG GCCCGAGCGG ATCGCGACGT CGGTAGGCGG CGGGCGCATC
GAGCGCGCGA GCCTGCACAC GGGCGGCAAG GCGTCGAGCC GCGGCCGCAA GGCGGGGCCC
GCCGCGAAGG CGTCGGCGAA GGCCGCGACG AAGAGCGGTG CGAAAGCCGC GCCCGCGAAA
ACCGCGGGCC GCAAGACGAC GAAGAAGAAG TAA
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| Protein sequence | MRFLLSALLV LTLAACAGTG PTAQNPAASD PQAASDYLRK SASAKETVDV DKQSVGDLTT
ADSDLWARIR RGFQMPDLQS DLVDMQASWY AQRPDYVQRM TERSQKYLYH IVEELESRHM
PTELALLPFI ESAYNPQALS VAKAAGMWQF MPATGRTFNL KRNMWQDERR DVLASTSAAL
DYLSRLHDMF GDWYLALAAY NWGEGNLQRA IARNQAAGLP TDYQSLRMPN ETRNYVPKLQ
AVKNIVTNPQ QYGLTLPEIP NHPYFVTVTT SRDIDVTVAA KLANLPLDEF KSLNPSFSKP
VILGATQPQI LLPFDNAAAF EKGLKSYDGQ LSSWTAYTVT ERARPAAIAE KIGVDADTLM
QVNKIPAGMR LKPGSTIVVP RTDDDDEDIS ADVAENGVLA MEPDVPDTRK MLIRVRRKQS
MEALASRYGV SAAQLRGWNR TRRAVVMPGQ TMVLHVPVGR AVPAEPGPER IATSVGGGRI
ERASLHTGGK ASSRGRKAGP AAKASAKAAT KSGAKAAPAK TAGRKTTKKK
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