| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1241 |
|---|
| Symbol | |
|---|
| ID | 4680580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1219950 |
|---|
| End bp | 1221851 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639845514 |
|---|
| Product | nitrite/sulfite reductase family protein |
|---|
| Protein accession | YP_992576 |
|---|
| Protein GI | 121599277 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGATCC TCGCGCCGCC GATGCGGCGC CTCGCAACCG ACACGCGCGA CCGCGCGCGT
GCCGCCCCAC CGCATTGCCC GGCCATGTAC CGATACACCG AATTCGACAA GGCGTTCGTG
CGCAACCGCG CCGCCCAGTT TCGCGACCAG CTCGAACGCT GGCGGCAAGG CGCGCTCAGC
GAGGACGCAT TCCGCCCGCT GCGGCTGCAG AACGGCTGGT ATGTGCAGCG CCACGCGCCG
ATGCTGCGCG TCGCGGTGCC GTACGGCGAG CTGTCGAGCG CGCAGATCCG CATGCTCGCG
CGCATCGCGC GCGACTATGA CGTGCCGGAG CCGGCGCGCT ACCGCGCCGC GTGCGACGCG
CAGGCGCGGC TCGGCACCGT GCGCCTGCCG ACGCGCAACG CGCATTTCAC GACGCGCACG
AACGTGCAGT TCAACTGGAT CCCGCTCGAG AAGGCGGCCG ACGTGATGGA CCTGCTCGCG
ACCGTCGACA TGCACGGCAT CCAGACGAGC GGCAACTGCA TCCGCAACAT CTCGTGCGAC
GAGCGCGCGA GCGTCGCGCC CGACGAAATC GCCGATCCGC GGCCGTTCGC CGAAGTGATG
CGCCAATGGA CGACGCTGCA TCCCGAATTC GCGTTCCTGC CGCGCAAGTT CAAGATTGCG
ATCACGGGCG CGGCCGACGA TCGCGCGGCG ACCGACTGGC ACGATGTCGG CTTAAGGCTC
GTGCGCGACG CGGCGGGCGA ACTCGGCTTT CGCGTGAGCG TCGGCGGCGG CATGGGGCGC
ACGCCGATGA CGGCCACGCT CGTGCGCGCA TTCGTGCCGT GGCGGCACGT GATGAACTAC
ATCGAGGCGA TCGTGCGCGT GTACAACCGC TACGGCCGCC GCGACAACAG GTACAAGGCG
CGCATCAAGA TCCTCGTGAA GGCCGAGGGC CAGCGCTACA TCGACGACGT CGACGAGGAA
TTCCGGCAGA TCGTCGAGCA CGACGGCGGC CCGCATACGA TCGAGCAGGC GGAGTTCGAC
CGCGTATGCG CGTCGTTCGT GCCGCCCGTG CCGCCGCCGT GCGCGGCCGG GCGCCACGCA
AAGACCGATA TCGACGCCGA CATGGACGCG GCGCTCGCGC GCATGCGCAC GCTCGCCGGC
GCACAGCCCG CGTTCGCGCG CTGGCTCGAG CGCAACGTCG CGCCGCACCG GGATCCCGCG
CGGCGGATCG TCACGCTGTC GTTCAAGCGC AGGCATCAGG CGCCCGGCGA TGCGTCGCCC
GAGCAGCTCG ACGCGCTCGC GCACCTCGCC GAGCGCTTTT CCGCCGGCGA GGCGCGCGTC
ACGCACGCGC AGAACGTCGT GCTGCCGTGG GTGCGCGCGA TCGATCTGCA CGCGCTGTGG
GAGGCCGCGC GCGACGCGGG CCTCGCGAGC GCGAACGTGC GGCTGTTGAC CGACATGATC
GCGTGCCCCG GCGGCGATTT CTGCGCGCTC GCGAACGCGC GCTCGATCCC GATCGCCGAT
GCGATCGCCG AACGCTTCGA CGATCTCGAC GAGTTGCACG ACATCGGCGA CGTCGACCTG
CACGTGAGCG GCTGCATCAA CTCGTGCGGC CATCATCACA GCGGCCACAT CGGCATCCTC
GGCGTCGACA AGGACGGCGA CGAGTGGTAC CAGGTGACGC TCGGCGGCTC CGACGGCACG
GCCGCGAACG GCCCCGCGCA GCCGGGCAAG GTGATCGGGC CGTCGTTCTC GGCCGACGAG
ATCGTCGACG TCGTCGACGC GCTCGTCGCC ACCTATCTGC GCGTGCGGCG AACCGAGGCC
GGGCGCGTCG AACGCTTCAT CGACGCGTAC CGCCGCGTCG GCCCCGAGCC CTTCAAGGCC
GCCGCGAACG CGGCGCGCCA TCCCGAGACG AGTGTCGCAT GA
|
|---|
| Protein sequence | MVILAPPMRR LATDTRDRAR AAPPHCPAMY RYTEFDKAFV RNRAAQFRDQ LERWRQGALS
EDAFRPLRLQ NGWYVQRHAP MLRVAVPYGE LSSAQIRMLA RIARDYDVPE PARYRAACDA
QARLGTVRLP TRNAHFTTRT NVQFNWIPLE KAADVMDLLA TVDMHGIQTS GNCIRNISCD
ERASVAPDEI ADPRPFAEVM RQWTTLHPEF AFLPRKFKIA ITGAADDRAA TDWHDVGLRL
VRDAAGELGF RVSVGGGMGR TPMTATLVRA FVPWRHVMNY IEAIVRVYNR YGRRDNRYKA
RIKILVKAEG QRYIDDVDEE FRQIVEHDGG PHTIEQAEFD RVCASFVPPV PPPCAAGRHA
KTDIDADMDA ALARMRTLAG AQPAFARWLE RNVAPHRDPA RRIVTLSFKR RHQAPGDASP
EQLDALAHLA ERFSAGEARV THAQNVVLPW VRAIDLHALW EAARDAGLAS ANVRLLTDMI
ACPGGDFCAL ANARSIPIAD AIAERFDDLD ELHDIGDVDL HVSGCINSCG HHHSGHIGIL
GVDKDGDEWY QVTLGGSDGT AANGPAQPGK VIGPSFSADE IVDVVDALVA TYLRVRRTEA
GRVERFIDAY RRVGPEPFKA AANAARHPET SVA
|
|---|
| |