Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1232 |
Symbol | glmS-1 |
ID | 4680174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1211266 |
End bp | 1213161 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639845505 |
Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_992567 |
Protein GI | 121599498 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.409865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCGGC GCGATGTCGT GCCCAACCTG GTGGACGGGC TGAAGCGGCT CGAATACCGC GGCTACGATT CGTGCGGCGT GGTCGTCTAT CAGGACCGGC GGCTCGTGCG GGCGCGCAGC GTCGATCGCG TCGCGGCATT GCAGCGCGAG ATCTCGGCCC GCGCGTTGTC GGGCTACACG GGTATCGCGC ACACGCGCTG GGCGACGCAC GGCGCGCCCG TGACGGCCAA CGCGCATCCG CATTTTTCGT CGGGCGTCGC TACGCCGGGC GTCGCTACGT CGGGCGCACC GGCGGCGAGC GCCGCCGCGT CCGGCGGCAC CGCGCAGGCC GACGCGTCAC CCGAAGCCCG CGCGCGGATC GCGCTGTCGC ACAACGGCAT CATCGAGAAC TACGAGGCGC TGCGCGCGGA CCTCGAGCGG CACGGCTACG CGTTCGCGAG CCAGACCGAC AGCGAGGCGA TCGCGCATCT CGTCGATCAT CTGTACGACG GCGACCTGTT CGACGCGGTG CGGCGCGCGC TCGCGCGGCT GCGCGGCAGT TACGCGATCG CGGTGATGTG CCGCGACGAG CCGCACCGGA TCGTCGGCGC GCGCGACGGG ATGCCGCTCG TCGTCGGCAT CGGCGACGGC GAGCACTTCC TCGCGTCGGA CGCGATCGCG CTGTCGAACC TCACCGACCG GATCGCGTAT CTCGAGAACG GCGACGTCGT CGATATCCAG CTGCACCGCC ACTGGATCGT CGACGCGAGC GGGCGGCGCG TCGAGCGGAC GGTGCACACG ATCGCCGCGC ATGTGGCGGC GGCCGATCTC GGCGGCTATC GCTACTACAT GCAAAAGGAG ATCTTCGAGC AGCCGCGCGC GGTCGCCGAT ACGCTGCTCG ACGTCACGTC GATCATGCCC GAGCTGTTCG GCGATCGCGC ATGGCGCGCG CTGAGCGCGG CGGACTCGGT GCTGCTGCTC GCGTGCGGCG GCAGCTATCA CGCGGCGCTC ACCGCGAAAT ACTGGATCGA GAGCATCGCC GGCCTGCCGG CGAACGTCGA GATCGCGAGC GAGTTCCGCT ATCGCGACGG CGTGCCGAAT CCGAAGGCGC TCGTCGTCGC GGTGTCGCAA AGCGGCGAGA CGGCCGACGT GCTCGGCGCG GTGCACGCGG CGAAGCGGCT CGGCATGCCG AACACGCTCG CGATCTGCAA CGTGCCGACG AGCGCGCTCG TGCGCGAATG CGCGTCGAGC TTCATCACGC GGGCCGGCAT CGAGGTGGGC GTCGCGTCGA CGAAGGCGTT CACGACGCAG CTCGTCGCGC TGTTCCTGTT GACGCTCGCG CTCGCGCAGG TGCGCGCGCG CTTGTCCGAC GAAGACGAGA AGCGGCACCT GCACGCGCTG CGCCACCTGC CCGAGGCGAT GAGCAAGGTG CTCGCGCTCG AGCCGCGGAT CATCGCGTGG TCCGAGCGGC TCGCGCGGCG CGAGAACATG CTGTTCCTCG GCCGCGGGAT GCATTATCCG ATCGCGCTCG AAGGCGCGCT GAAGATGAAG GAGATCTCGT ACATCCACGC GGAGGCGTAC GCGGCGGGCG AATTGAAGCA CGGCCCGCTC GCGCTCGTGA GCGACGAGAT GCCCGTCATC GCGGTCGCGC CGAACGACCG GCTGCTCGAG AAGCTGCGCT CGAACATGCA CGAGGTGAGC GCGCGCAACG GCCGGCTCTT CGTGTTCGCC GACGTCGACT GCGCGATCGC GAGCGCGCCG GGCCTCGACG TGATTCGCCT CACCGAATAC TACGGGCCGC TCTCGCCGAT CCTGCATGCG GTTCCGATGC AACTGCTCGC GTTCCACGCG GCGCTCGCGC GCGGCACCGA TATCGACAAG CCGCGCAATC TCGCGAAATC CGTGACGGTC GAGTGA
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Protein sequence | MARRDVVPNL VDGLKRLEYR GYDSCGVVVY QDRRLVRARS VDRVAALQRE ISARALSGYT GIAHTRWATH GAPVTANAHP HFSSGVATPG VATSGAPAAS AAASGGTAQA DASPEARARI ALSHNGIIEN YEALRADLER HGYAFASQTD SEAIAHLVDH LYDGDLFDAV RRALARLRGS YAIAVMCRDE PHRIVGARDG MPLVVGIGDG EHFLASDAIA LSNLTDRIAY LENGDVVDIQ LHRHWIVDAS GRRVERTVHT IAAHVAAADL GGYRYYMQKE IFEQPRAVAD TLLDVTSIMP ELFGDRAWRA LSAADSVLLL ACGGSYHAAL TAKYWIESIA GLPANVEIAS EFRYRDGVPN PKALVVAVSQ SGETADVLGA VHAAKRLGMP NTLAICNVPT SALVRECASS FITRAGIEVG VASTKAFTTQ LVALFLLTLA LAQVRARLSD EDEKRHLHAL RHLPEAMSKV LALEPRIIAW SERLARRENM LFLGRGMHYP IALEGALKMK EISYIHAEAY AAGELKHGPL ALVSDEMPVI AVAPNDRLLE KLRSNMHEVS ARNGRLFVFA DVDCAIASAP GLDVIRLTEY YGPLSPILHA VPMQLLAFHA ALARGTDIDK PRNLAKSVTV E
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