Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1215 |
Symbol | |
ID | 4681217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1198163 |
End bp | 1199224 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639845488 |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_992550 |
Protein GI | 121601197 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0399502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGTCC GCCGTTCGCT TCTTCCGCGC TCGCCGCTCG CCGCCGTGCG TCGCGCGTGC GCCGCCATGC TGATCCCCGT CGCGTCGCTC GCGCTGTCGC TCGGCGCATC CGCCGCGCAC GCGCAAGACA CCGCGATCTG CTACAACTGC CCGCCCGAAT GGGCCGACTG GGCCGCGCAG ATCGCCGCGA TCAAGCAGCG GACCGGCATT CGCGTGCCGT TCGACAACAA GAACTCGGGC CAGGCGATCG CGCAACTGAT CGCCGAGCAG AAGAGCCCCG TCGCGGACGT CGTCTATCTC GGCGTGTCCT CGGCGTTCCA GGCGAAGGAC AAGGGCGTCG TCGCCCCCTA CAAGCCCGCG CACTGGAGCG ACATCCCGGC GAATCTCAAG GACCCGCAAG GCTACTGGTT CGCGATCCAC TCCGGCACGC TCGGCTTCTT CGTCAACAAG GACGCGCTCG ACGGCAAGCC GGTGCCGCGC ACGTGGGCCG ATCTGCTCAA GCCCGAGTAC AAGGGGATGG TCGGCTATCT CGATCCGTCG AGCGCGTTCG TCGGCTATGC GGGCGCCGTC GCGGTGAACC AGGCGCTCGG CGGCAGCTTC GACGATTTCC GCCCGGCGCT CGACTGGTTC CGCAAGCTGA AGGCGAACCA GCCGATCGTG CCGAAGCAGA CCGCATACGC GCGCGTGCTG TCCGGCGAGA TTCCGATCCT GCTCGACTAC GATTTCGACG CCTATCGCGC GAAGTACAAG GATCATGCGA ACGTCGAATT CGTGATTCCG AAGGAAGGCA CGATCTCGGT GCCGTACGTG ATGAGCCTCG TGAAGGGCGC GCCGCACGAG GCGAACGGCA GGAAGGTGCT CGATTTCGTG CTGTCCGACG AAGGCCAGAA GCTGTGGGCG AACGCGTATC TGCGGCCGGT GCGCGCGCAG GCGCTCGGCG CCGACGTCGC CGCGCAGTTC CTGCCGGCGA GCGAGTACGC GCGCGCGAAG AGCGTCGACT TCGGCAAGCT CGCGGCCGGC CAGCAGGCGT TCGGCAAGCA GTATCTGCAA GCGATGCAAT AA
|
Protein sequence | MTVRRSLLPR SPLAAVRRAC AAMLIPVASL ALSLGASAAH AQDTAICYNC PPEWADWAAQ IAAIKQRTGI RVPFDNKNSG QAIAQLIAEQ KSPVADVVYL GVSSAFQAKD KGVVAPYKPA HWSDIPANLK DPQGYWFAIH SGTLGFFVNK DALDGKPVPR TWADLLKPEY KGMVGYLDPS SAFVGYAGAV AVNQALGGSF DDFRPALDWF RKLKANQPIV PKQTAYARVL SGEIPILLDY DFDAYRAKYK DHANVEFVIP KEGTISVPYV MSLVKGAPHE ANGRKVLDFV LSDEGQKLWA NAYLRPVRAQ ALGADVAAQF LPASEYARAK SVDFGKLAAG QQAFGKQYLQ AMQ
|
| |