Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1199 |
Symbol | |
ID | 4679239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1185140 |
End bp | 1185964 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639845472 |
Product | hypothetical protein |
Protein accession | YP_992534 |
Protein GI | 121599947 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.129039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACCG ATATGTCGAT TTCATTTTCC GTTTCGCTCC GCGCCGTCGC GGCGGCGCTC TCGCTTGCCG CGGCGGGCGC CGCGCAAGCG GCCGCGGACG GCGCGTGCAT GGCCCGCAGC CCCGACGGCC GGCAGGCGCT CGTCGAGCTC TATACGAGCG AGGGCTGCAG CAGTTGTCCG CCCGCCGACG ACTGGCTCGC ACGGCTCGCC GCGCGCCGCG CCGCGTTGCG CGTCGTGCCG CTCGCGCTGC ACGTCGATTA CTGGGACGGC CTCGGCTGGG CGGATCGCTT CGCGCAGCAT CGCTTCACCG AGCGGCAGCA CGCGCTTGCC GCGCGCGGCG GCGGCCGTTT CGTCTATACG CCGGAGGTCG CGGTTGACGG CCGCGAGCTG CGCGACTGGC GCGACGCGGA CGCGTTCGGG CGGCGCGTCG TCGCGACGGC GGCCGAGCCC GCGCGCGTCG GCATCGCGCT GGCCGCCAAG CGGCGCGCGG GCGCGCTCGA CGTCGCGCTG TCCGTGACGC CGCGCGTCGG CGCGCCGCGC GCGCTCGACG CCTATCTCGC GCTGTACGAG AACGGCGTCG AATCGCAGGT GCGCGCGGGC GAGAACCGAG GCGCGACGCT GCGGCACGAG CGCGTCGTGC GTCAATGGAT CGGGCCACTC GCCGCGACGG CCGACGCGCA CGCGTCGCTC GACGTGCGGC GCGCGCTGCC GCTGCCCGCG AACCTGCGCG CGGCGGACGC CGCACGGTAT GGCGTCGCGG CGTTTGTCGA GGATCCCGCG ACGGGCGACG TCCTGCAGGC GCTCGATTTG CCGCTGTGCG GCTGA
|
Protein sequence | MSTDMSISFS VSLRAVAAAL SLAAAGAAQA AADGACMARS PDGRQALVEL YTSEGCSSCP PADDWLARLA ARRAALRVVP LALHVDYWDG LGWADRFAQH RFTERQHALA ARGGGRFVYT PEVAVDGREL RDWRDADAFG RRVVATAAEP ARVGIALAAK RRAGALDVAL SVTPRVGAPR ALDAYLALYE NGVESQVRAG ENRGATLRHE RVVRQWIGPL AATADAHASL DVRRALPLPA NLRAADAARY GVAAFVEDPA TGDVLQALDL PLCG
|
| |